BLASTX nr result

ID: Atractylodes22_contig00049542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049542
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    98   6e-19
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    96   3e-18
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    92   6e-17
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    59   5e-07
emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]    57   1e-06

>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 49/85 (57%), Positives = 60/85 (70%)
 Frame = -3

Query: 387 IKRYGGRQSLKPLEELIDLIQSGTVEEHITEFEYLSSQVNRIPEPQYLGYFIGRLRSDLR 208
           I RYGGR+   P EEL  + Q G+VEE +  FE LSSQV R+PE QYLGYF+  L+  +R
Sbjct: 124 IARYGGRRLENPFEELSTIRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKPQIR 183

Query: 207 FGVRTFNPLNRVQAMKLAGDVESEL 133
             VRT NPLNR+Q M++A DVE EL
Sbjct: 184 RRVRTLNPLNRMQMMRIAKDVEEEL 208


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 65/150 (43%), Positives = 78/150 (52%), Gaps = 22/150 (14%)
 Frame = -3

Query: 387 IKRYGGRQSLKPLEELIDLIQSGTVEEHITEFEYLSSQVNRIPEPQYLGYFIGRLRSDLR 208
           I RYGGR+   P EEL  L Q G+VEE +  FE LSSQV R+PE QYLGYF+  L+  +R
Sbjct: 141 IARYGGRRLENPFEELSTLRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKPQIR 200

Query: 207 FGVRTFNPLNRVQAMKLAGDVESEL--------------GGVRVPRSVVPKGW-----KT 85
             VRT NP NR++ M++A DVE EL              GG      V  K W     K 
Sbjct: 201 RRVRTLNPRNRMEMMRIAKDVEDELKEEDDEGEHREVKKGGY---ERVGQKDWAGLLMKK 257

Query: 84  G---TGDDVRSLGKGYHGSGPDSQLGRNGT 4
           G     D  RS   G  GS P  + G NG+
Sbjct: 258 GGPQPRDATRSFQSG--GSNPSQKTGPNGS 285


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/85 (55%), Positives = 58/85 (68%)
 Frame = -3

Query: 387  IKRYGGRQSLKPLEELIDLIQSGTVEEHITEFEYLSSQVNRIPEPQYLGYFIGRLRSDLR 208
            I RY GR+   P EEL  L Q G+VEE +  FE LSSQV R+PE QYLGYF+  L++ +R
Sbjct: 814  IARYDGRRLENPFEELSTLRQIGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKAHIR 873

Query: 207  FGVRTFNPLNRVQAMKLAGDVESEL 133
              VRT NP  R+Q M++A DVE EL
Sbjct: 874  RRVRTLNPTTRMQMMRIAKDVEDEL 898


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/65 (43%), Positives = 42/65 (64%)
 Frame = -3

Query: 387 IKRYGGRQSLKPLEELIDLIQSGTVEEHITEFEYLSSQVNRIPEPQYLGYFIGRLRSDLR 208
           ++RYGG       E+L  L Q GT+EE+I +FE L +Q+ ++P  QYLGYF+  L+  +R
Sbjct: 151 LERYGGVSDGNVFEQLSALQQEGTIEEYIADFERLVAQLPKLPNDQYLGYFVHGLKDKIR 210

Query: 207 FGVRT 193
             VR+
Sbjct: 211 GKVRS 215


>emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
          Length = 1366

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/87 (39%), Positives = 47/87 (54%)
 Frame = -3

Query: 381 RYGGRQSLKPLEELIDLIQSGTVEEHITEFEYLSSQVNRIPEPQYLGYFIGRLRSDLRFG 202
           R+G      P+E LI L Q+ TVE++ ++FE LS+Q+  + E   L  F+  LR D+RF 
Sbjct: 127 RFGSSPYEDPMEALIRLKQTSTVEDYKSQFEALSNQLRGLAESYKLSCFLSGLREDIRFM 186

Query: 201 VRTFNPLNRVQAMKLAGDVESELGGVR 121
           VR  NP N   A  LA   E     +R
Sbjct: 187 VRMLNPSNLHIAFGLAKMQEENXAALR 213


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