BLASTX nr result

ID: Atractylodes22_contig00049537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049537
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN05720.1| RNA-directed DNA polymerase (Reverse transcriptas...    58   5e-16
ref|XP_003636833.1| Cytochrome P450 [Medicago truncatula] gi|355...    54   4e-15
ref|XP_002303192.1| predicted protein [Populus trichocarpa] gi|2...    55   3e-14
gb|ABD28415.2| hypothetical protein MtrDRAFT_AC148816g33v2 [Medi...    52   4e-14
emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulga...    53   2e-13

>gb|ABN05720.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 391

 Score = 58.2 bits (139), Expect(2) = 5e-16
 Identities = 23/54 (42%), Positives = 36/54 (66%)
 Frame = +3

Query: 180 IFGIGVSEECLLEMA*SINCAPGSIPFTYLGLPVGKNMGKTEAWNPIIQKLKSK 341
           + G+ V++  L E A  +NC  GS+PFTYLGLP+G N  +   W P++ ++KS+
Sbjct: 130 LVGVNVADSWLTEAASLLNCKVGSLPFTYLGLPIGGNPRRLSFWEPVVHRIKSR 183



 Score = 50.8 bits (120), Expect(2) = 5e-16
 Identities = 30/53 (56%), Positives = 36/53 (67%)
 Frame = +1

Query: 19  VSVGNDCVRVSHLQFADVTLFMGEWSGNNLRNLQSVLKCFQMASVLKINMEKS 177
           V  GN+ V VSHLQFAD TL +GE S  N+R L++VL  F+  S LKIN  KS
Sbjct: 77  VGSGNEVV-VSHLQFADDTLLLGEKSWANVRALRTVLILFEAVSGLKINFHKS 128


>ref|XP_003636833.1| Cytochrome P450 [Medicago truncatula] gi|355502768|gb|AES83971.1|
            Cytochrome P450 [Medicago truncatula]
          Length = 1639

 Score = 54.3 bits (129), Expect(2) = 4e-15
 Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = +1

Query: 4    GIVKGVSVG-NDCVRVSHLQFADVTLFMGEWSGNNLRNLQSVLKCFQMASVLKINMEKS 177
            G+  G  VG N+ V +SHLQF D TL +GE S  N+R+LQ++L  F+  S LK+N  KS
Sbjct: 1155 GLFSGYKVGANNHVSISHLQFVDDTLLIGERSWANIRSLQALLLLFEATSGLKVNFHKS 1213



 Score = 51.6 bits (122), Expect(2) = 4e-15
 Identities = 21/54 (38%), Positives = 34/54 (62%)
 Frame = +3

Query: 180  IFGIGVSEECLLEMA*SINCAPGSIPFTYLGLPVGKNMGKTEAWNPIIQKLKSK 341
            + G+ + +  L E A  +NC  G+ PF YLGLP+G +  K + W P+I ++KS+
Sbjct: 1215 LVGVNIHDSWLAEAASVLNCKLGTAPFLYLGLPIGGDPRKLKFWQPLIDRIKSR 1268


>ref|XP_002303192.1| predicted protein [Populus trichocarpa] gi|222840624|gb|EEE78171.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score = 55.1 bits (131), Expect(2) = 3e-14
 Identities = 26/64 (40%), Positives = 42/64 (65%)
 Frame = +1

Query: 4   GIVKGVSVGNDCVRVSHLQFADVTLFMGEWSGNNLRNLQSVLKCFQMASVLKINMEKSKF 183
           G+++G++ GN    +SHLQFAD TL     S ++L+N++ +L CF++ S LK+N  KS  
Sbjct: 9   GLIEGLNFGNTGPALSHLQFADDTLIFSTASLSSLQNIKRILLCFELLSGLKVNFYKSSI 68

Query: 184 LVSG 195
           +  G
Sbjct: 69  IGVG 72



 Score = 48.1 bits (113), Expect(2) = 3e-14
 Identities = 19/54 (35%), Positives = 29/54 (53%)
 Frame = +3

Query: 180 IFGIGVSEECLLEMA*SINCAPGSIPFTYLGLPVGKNMGKTEAWNPIIQKLKSK 341
           I G+G+ +      A  + C    +P TYLGLP+G NM +   W PII+ +  +
Sbjct: 68  IIGVGIEDHVCRYSAQILRCKQEQLPITYLGLPIGANMNRISMWKPIIRNISCR 121


>gb|ABD28415.2| hypothetical protein MtrDRAFT_AC148816g33v2 [Medicago truncatula]
          Length = 332

 Score = 51.6 bits (122), Expect(2) = 4e-14
 Identities = 22/51 (43%), Positives = 31/51 (60%)
 Frame = +3

Query: 180 IFGIGVSEECLLEMA*SINCAPGSIPFTYLGLPVGKNMGKTEAWNPIIQKL 332
           + GI VSE+ +      +NC+ GSI F YLGLPVG NM     W P+++ +
Sbjct: 83  LVGINVSEDFMAMACDFLNCSAGSITFKYLGLPVGANMRSMSTWEPLVETI 133



 Score = 50.8 bits (120), Expect(2) = 4e-14
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = +1

Query: 28  GNDCVRVSHLQFADVTLFMGEWSGNNLRNLQSVLKCFQMASVLKINMEKSKFL 186
           GND V VSHLQ+AD TL +G+ S  NL  ++++L+ FQM S LKIN  KS  +
Sbjct: 33  GNDLV-VSHLQYADDTLCIGKASVQNLWTMKAILRGFQMVSGLKINFSKSSLV 84


>emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1379

 Score = 53.1 bits (126), Expect(2) = 2e-13
 Identities = 23/54 (42%), Positives = 33/54 (61%)
 Frame = +3

Query: 180 IFGIGVSEECLLEMA*SINCAPGSIPFTYLGLPVGKNMGKTEAWNPIIQKLKSK 341
           + G+ +S+      A  + C  GSIPFTYLGLP+G N  + + W P+I+KL  K
Sbjct: 718 LIGLNISDARANNAANLLQCKVGSIPFTYLGLPIGGNPSRIQFWKPVIEKLCEK 771



 Score = 47.0 bits (110), Expect(2) = 2e-13
 Identities = 21/58 (36%), Positives = 36/58 (62%)
 Frame = +1

Query: 13  KGVSVGNDCVRVSHLQFADVTLFMGEWSGNNLRNLQSVLKCFQMASVLKINMEKSKFL 186
           +G+    D   +SHLQ+AD TL   + S ++L++++S L  FQ+ S L++N  KS  +
Sbjct: 662 RGIETSRDGPMISHLQYADDTLVFSDTSTDSLKSIKSTLILFQLVSGLQVNFHKSSLI 719


Top