BLASTX nr result

ID: Atractylodes22_contig00049530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049530
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510970.1| ubiquitin-protein ligase, putative [Ricinus ...    56   3e-06
ref|XP_002326613.1| predicted protein [Populus trichocarpa] gi|2...    53   6e-06
ref|XP_003540579.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...    55   8e-06
ref|XP_002303496.1| f-box family protein [Populus trichocarpa] g...    54   1e-05

>ref|XP_002510970.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223550085|gb|EEF51572.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 531

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/48 (54%), Positives = 32/48 (66%)
 Frame = -3

Query: 180 TFCDHMMDDGWLSPLSYCENL*TLMFVLCKGID*NLNMMSTWGFAQSI 37
           TF DH MDDGWLS +SYCENL TL F+ CK ID +  +    G  Q++
Sbjct: 317 TFSDHRMDDGWLSAISYCENLKTLRFLSCKKIDLHPGLDEFLGSCQAL 364


>ref|XP_002326613.1| predicted protein [Populus trichocarpa] gi|222833935|gb|EEE72412.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score = 52.8 bits (125), Expect(2) = 6e-06
 Identities = 23/33 (69%), Positives = 25/33 (75%)
 Frame = -3

Query: 180 TFCDHMMDDGWLSPLSYCENL*TLMFVLCKGID 82
           T CDH MD GWL+ LSYCENL TL F+ CK ID
Sbjct: 147 TICDHRMDCGWLAGLSYCENLKTLRFLSCKRID 179



 Score = 21.9 bits (45), Expect(2) = 6e-06
 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 5/22 (22%)
 Frame = -2

Query: 67  DEYLGFCP----IH-KLCSFRD 17
           DEYLG CP    +H + C  RD
Sbjct: 185 DEYLGCCPALERLHLRKCQLRD 206


>ref|XP_003540579.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At5g07670-like
           [Glycine max]
          Length = 497

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/38 (65%), Positives = 27/38 (71%)
 Frame = -3

Query: 180 TFCDHMMDDGWLSPLSYCENL*TLMFVLCKGID*NLNM 67
           TF DH MDDGWL+ +SYCENL TL F  CK ID N  M
Sbjct: 302 TFSDHRMDDGWLAAISYCENLKTLRFQSCKKIDPNPGM 339


>ref|XP_002303496.1| f-box family protein [Populus trichocarpa]
           gi|222840928|gb|EEE78475.1| f-box family protein
           [Populus trichocarpa]
          Length = 551

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 23/33 (69%), Positives = 26/33 (78%)
 Frame = -3

Query: 180 TFCDHMMDDGWLSPLSYCENL*TLMFVLCKGID 82
           T CDH MD+GWL+ LSYCENL TL F+ CK ID
Sbjct: 323 TICDHRMDNGWLAGLSYCENLKTLRFLSCKRID 355


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