BLASTX nr result

ID: Atractylodes22_contig00049440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049440
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37603.3| unnamed protein product [Vitis vinifera]               84   1e-14
ref|XP_002282621.1| PREDICTED: pre-mRNA-splicing factor ISY1 hom...    84   1e-14
ref|XP_002520620.1| Pre-mRNA-splicing factor isy-1, putative [Ri...    83   2e-14
ref|XP_004135885.1| PREDICTED: pre-mRNA-splicing factor ISY1 hom...    82   5e-14
ref|NP_188509.1| pre-mRNA-splicing factor ISY1 [Arabidopsis thal...    82   5e-14

>emb|CBI37603.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 42/46 (91%), Positives = 43/46 (93%)
 Frame = +3

Query: 93  HVPLPDEKEIERMVLEKKKMELLSKYASEDLLEEQVEAKAMLNIQR 230
           HVPLPDEKEIERMV+EKKKMELLSKY SE LLEEQ EAKAMLNIQR
Sbjct: 217 HVPLPDEKEIERMVVEKKKMELLSKYTSEGLLEEQTEAKAMLNIQR 262


>ref|XP_002282621.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog isoform 1 [Vitis
           vinifera] gi|359476953|ref|XP_003631919.1| PREDICTED:
           pre-mRNA-splicing factor ISY1 homolog isoform 2 [Vitis
           vinifera] gi|359476955|ref|XP_003631920.1| PREDICTED:
           pre-mRNA-splicing factor ISY1 homolog isoform 3 [Vitis
           vinifera] gi|147773415|emb|CAN60270.1| hypothetical
           protein VITISV_029395 [Vitis vinifera]
          Length = 298

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 42/46 (91%), Positives = 43/46 (93%)
 Frame = +3

Query: 93  HVPLPDEKEIERMVLEKKKMELLSKYASEDLLEEQVEAKAMLNIQR 230
           HVPLPDEKEIERMV+EKKKMELLSKY SE LLEEQ EAKAMLNIQR
Sbjct: 253 HVPLPDEKEIERMVVEKKKMELLSKYTSEGLLEEQTEAKAMLNIQR 298


>ref|XP_002520620.1| Pre-mRNA-splicing factor isy-1, putative [Ricinus communis]
           gi|223540181|gb|EEF41756.1| Pre-mRNA-splicing factor
           isy-1, putative [Ricinus communis]
          Length = 302

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/45 (93%), Positives = 43/45 (95%)
 Frame = +3

Query: 93  HVPLPDEKEIERMVLEKKKMELLSKYASEDLLEEQVEAKAMLNIQ 227
           HVPLPDEKEIERMVLEKKKM+LLSKYASE LLEEQ EAKAMLNIQ
Sbjct: 257 HVPLPDEKEIERMVLEKKKMDLLSKYASEGLLEEQSEAKAMLNIQ 301


>ref|XP_004135885.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Cucumis sativus]
           gi|449491085|ref|XP_004158794.1| PREDICTED:
           pre-mRNA-splicing factor ISY1 homolog isoform 1 [Cucumis
           sativus] gi|449491087|ref|XP_004158795.1| PREDICTED:
           pre-mRNA-splicing factor ISY1 homolog isoform 2 [Cucumis
           sativus]
          Length = 303

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/46 (89%), Positives = 44/46 (95%)
 Frame = +3

Query: 93  HVPLPDEKEIERMVLEKKKMELLSKYASEDLLEEQVEAKAMLNIQR 230
           HVPLPDEKEIE+MVLEKKKMELLSKYAS+ LLEEQ EAK+MLNIQR
Sbjct: 258 HVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLNIQR 303


>ref|NP_188509.1| pre-mRNA-splicing factor ISY1 [Arabidopsis thaliana]
           gi|9293904|dbj|BAB01807.1| unnamed protein product
           [Arabidopsis thaliana] gi|18086381|gb|AAL57650.1|
           AT3g18790/MVE11_17 [Arabidopsis thaliana]
           gi|19699138|gb|AAL90935.1| AT3g18790/MVE11_17
           [Arabidopsis thaliana] gi|26452139|dbj|BAC43158.1|
           unknown protein [Arabidopsis thaliana]
           gi|227202802|dbj|BAH56874.1| AT3G18790 [Arabidopsis
           thaliana] gi|332642628|gb|AEE76149.1| pre-mRNA-splicing
           factor ISY1 [Arabidopsis thaliana]
          Length = 300

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/46 (84%), Positives = 44/46 (95%)
 Frame = +3

Query: 93  HVPLPDEKEIERMVLEKKKMELLSKYASEDLLEEQVEAKAMLNIQR 230
           HVPLPDEKEIE+MVLEKKKM+LLSKYASEDL+E+Q EAK+MLNI R
Sbjct: 255 HVPLPDEKEIEKMVLEKKKMDLLSKYASEDLVEQQTEAKSMLNIHR 300


Top