BLASTX nr result

ID: Atractylodes22_contig00049437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049437
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...   148   5e-34
dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis t...   147   9e-34
gb|AFJ66169.1| hypothetical protein 11M19.13 [Arabidopsis halleri]    147   1e-33
gb|AAG52211.1|AC022288_10 hypothetical protein; 74056-75837 [Ara...   145   3e-33
gb|AAY87197.1| reverse transcriptase [Ephedra distachya]              145   4e-33

>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/94 (73%), Positives = 81/94 (86%)
 Frame = +1

Query: 1    EAFAPVARIETVRLILALAAYHGWQLHHLDVKSAFLHGELKEEVYVAQPEGFIQPGSSGK 180
            E FAPVARIE++RL+++LA+  GW+LHHLDVK+AFLHGEL EEVYV QPEGF + G   K
Sbjct: 799  EVFAPVARIESIRLLISLASAKGWELHHLDVKTAFLHGELNEEVYVTQPEGFEKKGEEHK 858

Query: 181  VYKLSKALYGLRQAPRAWNMKLDQTLRSLDFKKC 282
            V+KLSKALYGLRQAPRAWN KLD+ L+SL FKKC
Sbjct: 859  VFKLSKALYGLRQAPRAWNTKLDRVLKSLRFKKC 892


>dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1250

 Score =  147 bits (371), Expect = 9e-34
 Identities = 70/95 (73%), Positives = 82/95 (86%)
 Frame = +1

Query: 1    EAFAPVARIETVRLILALAAYHGWQLHHLDVKSAFLHGELKEEVYVAQPEGFIQPGSSGK 180
            E FAPVARIETVR I+ALAA +GW++HHLDVK+AFLHGELKE V+V+QPEGF + GS GK
Sbjct: 788  EVFAPVARIETVRFIIALAASNGWEVHHLDVKTAFLHGELKEIVFVSQPEGFTEKGSEGK 847

Query: 181  VYKLSKALYGLRQAPRAWNMKLDQTLRSLDFKKCN 285
            VYKL+KALYGLRQAPRAWN KL++ L  L F KC+
Sbjct: 848  VYKLNKALYGLRQAPRAWNNKLNKILGELKFVKCS 882


>gb|AFJ66169.1| hypothetical protein 11M19.13 [Arabidopsis halleri]
          Length = 1273

 Score =  147 bits (370), Expect = 1e-33
 Identities = 67/95 (70%), Positives = 79/95 (83%)
 Frame = +1

Query: 1    EAFAPVARIETVRLILALAAYHGWQLHHLDVKSAFLHGELKEEVYVAQPEGFIQPGSSGK 180
            E F PVAR+ET++L++ALAA HGW++HHLDVK+AFLHGELKE+VYV QPEGF   G   K
Sbjct: 753  EVFVPVARLETIQLLIALAASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVKGEEHK 812

Query: 181  VYKLSKALYGLRQAPRAWNMKLDQTLRSLDFKKCN 285
            VYKLSKALYGL+QAPRAWN  LDQ L+   FKKC+
Sbjct: 813  VYKLSKALYGLKQAPRAWNTNLDQILKEFKFKKCS 847


>gb|AAG52211.1|AC022288_10 hypothetical protein; 74056-75837 [Arabidopsis thaliana]
          Length = 503

 Score =  145 bits (366), Expect = 3e-33
 Identities = 69/95 (72%), Positives = 79/95 (83%)
 Frame = +1

Query: 1   EAFAPVARIETVRLILALAAYHGWQLHHLDVKSAFLHGELKEEVYVAQPEGFIQPGSSGK 180
           E FAPVARIET+RL++ LAA HGW++HHLDVK+AFLHGELKE VYV QPEGF + GS  K
Sbjct: 55  EVFAPVARIETIRLLINLAASHGWEIHHLDVKTAFLHGELKETVYVYQPEGFERKGSEDK 114

Query: 181 VYKLSKALYGLRQAPRAWNMKLDQTLRSLDFKKCN 285
           VYKL+KALYGLRQAPRAWN KL+  L  L F KC+
Sbjct: 115 VYKLNKALYGLRQAPRAWNNKLNHILVELQFLKCS 149


>gb|AAY87197.1| reverse transcriptase [Ephedra distachya]
          Length = 142

 Score =  145 bits (365), Expect = 4e-33
 Identities = 64/95 (67%), Positives = 84/95 (88%)
 Frame = +1

Query: 1   EAFAPVARIETVRLILALAAYHGWQLHHLDVKSAFLHGELKEEVYVAQPEGFIQPGSSGK 180
           E FAPVAR++T+R+ILALAA+ GW++HHLDVKSAFL+G+L+EEVYV+QPEGF+      K
Sbjct: 18  EVFAPVARLDTIRMILALAAHRGWEIHHLDVKSAFLNGDLEEEVYVSQPEGFVVKAEEHK 77

Query: 181 VYKLSKALYGLRQAPRAWNMKLDQTLRSLDFKKCN 285
           VY+LSKALYGLRQAPR WN++LD++++SL F KC+
Sbjct: 78  VYRLSKALYGLRQAPRTWNIRLDRSMKSLGFVKCS 112


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