BLASTX nr result
ID: Atractylodes22_contig00049417
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00049417 (343 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002534949.1| conserved hypothetical protein [Ricinus comm... 80 1e-22 ref|XP_002527161.1| cytochrome C oxidase, subunit II, putative [... 97 1e-18 gb|ABV23661.1| cytochrome oxidase subunit 2 [Boehmeria nivea] gi... 78 6e-13 >ref|XP_002534949.1| conserved hypothetical protein [Ricinus communis] gi|223524315|gb|EEF27434.1| conserved hypothetical protein [Ricinus communis] Length = 90 Score = 80.5 bits (197), Expect(2) = 1e-22 Identities = 42/60 (70%), Positives = 44/60 (73%) Frame = -2 Query: 264 MPSTRALLATNHSLAGRSGSAFQVRYPNRILCSTGSLTPXXXXXXXXXXXXXXLQPLAVI 85 MPSTRALLATNHSLAGR GSAFQVRYPNR+LCSTGSL P LQPLAV+ Sbjct: 1 MPSTRALLATNHSLAGRLGSAFQVRYPNRLLCSTGSLAPSSILSTALLLGSLQLQPLAVL 60 Score = 50.8 bits (120), Expect(2) = 1e-22 Identities = 24/27 (88%), Positives = 25/27 (92%) Frame = -1 Query: 82 LLLGWLAPWVVRLSQSGLRSRPIFPGA 2 LLLGWLAP VVRLSQSGL SRP+FPGA Sbjct: 60 LLLGWLAPEVVRLSQSGLSSRPMFPGA 86 >ref|XP_002527161.1| cytochrome C oxidase, subunit II, putative [Ricinus communis] gi|223533482|gb|EEF35227.1| cytochrome C oxidase, subunit II, putative [Ricinus communis] Length = 139 Score = 97.1 bits (240), Expect = 1e-18 Identities = 46/59 (77%), Positives = 50/59 (84%) Frame = +2 Query: 11 KDRPTAEPTLAQPHHPGCEPPEKQAITASGWSSMEPRSKAVDKIEEGVRLPVEQRIRLG 187 K RPTAE TLAQPHHPGC+PP+KQ ITAS WS EPRSKAVDKI+EG RL VEQR +LG Sbjct: 81 KHRPTAESTLAQPHHPGCDPPKKQDITASDWSCREPRSKAVDKIKEGARLLVEQRRQLG 139 >gb|ABV23661.1| cytochrome oxidase subunit 2 [Boehmeria nivea] gi|157102084|gb|ABV23662.1| cytochrome oxidase subunit 2 [Boehmeria nivea] gi|157102086|gb|ABV23663.1| cytochrome oxidase subunit 2 [Boehmeria nivea] Length = 310 Score = 78.2 bits (191), Expect = 6e-13 Identities = 38/43 (88%), Positives = 40/43 (93%) Frame = +3 Query: 3 APGKIGRLRSPLWLSRTTQGASHPRSKLLQRAAGAVWSRGARQ 131 APG IGR+ SPLWLSRTT+GASHPRSKLLQRAAGAV SRGARQ Sbjct: 265 APGNIGRVPSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGARQ 307