BLASTX nr result

ID: Atractylodes22_contig00049417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049417
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534949.1| conserved hypothetical protein [Ricinus comm...    80   1e-22
ref|XP_002527161.1| cytochrome C oxidase, subunit II, putative [...    97   1e-18
gb|ABV23661.1| cytochrome oxidase subunit 2 [Boehmeria nivea] gi...    78   6e-13

>ref|XP_002534949.1| conserved hypothetical protein [Ricinus communis]
           gi|223524315|gb|EEF27434.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 80.5 bits (197), Expect(2) = 1e-22
 Identities = 42/60 (70%), Positives = 44/60 (73%)
 Frame = -2

Query: 264 MPSTRALLATNHSLAGRSGSAFQVRYPNRILCSTGSLTPXXXXXXXXXXXXXXLQPLAVI 85
           MPSTRALLATNHSLAGR GSAFQVRYPNR+LCSTGSL P              LQPLAV+
Sbjct: 1   MPSTRALLATNHSLAGRLGSAFQVRYPNRLLCSTGSLAPSSILSTALLLGSLQLQPLAVL 60



 Score = 50.8 bits (120), Expect(2) = 1e-22
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -1

Query: 82  LLLGWLAPWVVRLSQSGLRSRPIFPGA 2
           LLLGWLAP VVRLSQSGL SRP+FPGA
Sbjct: 60  LLLGWLAPEVVRLSQSGLSSRPMFPGA 86


>ref|XP_002527161.1| cytochrome C oxidase, subunit II, putative [Ricinus communis]
           gi|223533482|gb|EEF35227.1| cytochrome C oxidase,
           subunit II, putative [Ricinus communis]
          Length = 139

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/59 (77%), Positives = 50/59 (84%)
 Frame = +2

Query: 11  KDRPTAEPTLAQPHHPGCEPPEKQAITASGWSSMEPRSKAVDKIEEGVRLPVEQRIRLG 187
           K RPTAE TLAQPHHPGC+PP+KQ ITAS WS  EPRSKAVDKI+EG RL VEQR +LG
Sbjct: 81  KHRPTAESTLAQPHHPGCDPPKKQDITASDWSCREPRSKAVDKIKEGARLLVEQRRQLG 139


>gb|ABV23661.1| cytochrome oxidase subunit 2 [Boehmeria nivea]
           gi|157102084|gb|ABV23662.1| cytochrome oxidase subunit 2
           [Boehmeria nivea] gi|157102086|gb|ABV23663.1| cytochrome
           oxidase subunit 2 [Boehmeria nivea]
          Length = 310

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 38/43 (88%), Positives = 40/43 (93%)
 Frame = +3

Query: 3   APGKIGRLRSPLWLSRTTQGASHPRSKLLQRAAGAVWSRGARQ 131
           APG IGR+ SPLWLSRTT+GASHPRSKLLQRAAGAV SRGARQ
Sbjct: 265 APGNIGRVPSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGARQ 307


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