BLASTX nr result

ID: Atractylodes22_contig00049375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049375
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301430.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
gb|AFW90588.1| putative rac GTPase activating protein [Solanum t...    57   2e-06
gb|AAC62625.1| rac GTPase activating protein 2 [Lotus japonicus]       56   3e-06
ref|XP_003521820.1| PREDICTED: rho GTPase-activating protein 25-...    56   3e-06
ref|XP_002880260.1| hypothetical protein ARALYDRAFT_483835 [Arab...    56   3e-06

>ref|XP_002301430.1| predicted protein [Populus trichocarpa] gi|222843156|gb|EEE80703.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/58 (50%), Positives = 35/58 (60%)
 Frame = +2

Query: 131 SNHNFTIXXXXXXXXXXXXXTCTLHHSQDVSSSLDIGFPTDVHHLSHVTFDRFNGFLG 304
           SN  F               TC++    DVSSS+DI +PT+V H+SHVTFDRFNGFLG
Sbjct: 10  SNKEFAFLDIFVTALRKSLVTCSVERD-DVSSSMDISWPTEVKHVSHVTFDRFNGFLG 66


>gb|AFW90588.1| putative rac GTPase activating protein [Solanum tuberosum]
          Length = 215

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 23/38 (60%), Positives = 32/38 (84%)
 Frame = +2

Query: 191 TCTLHHSQDVSSSLDIGFPTDVHHLSHVTFDRFNGFLG 304
           +C +   +DV S+++IG+PTDV HL+HVTFDRF+GFLG
Sbjct: 49  SCRVDRQEDVVSAVEIGWPTDVQHLTHVTFDRFHGFLG 86


>gb|AAC62625.1| rac GTPase activating protein 2 [Lotus japonicus]
          Length = 424

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/65 (47%), Positives = 39/65 (60%)
 Frame = +2

Query: 110 RHQGPAQSNHNFTIXXXXXXXXXXXXXTCTLHHSQDVSSSLDIGFPTDVHHLSHVTFDRF 289
           R Q   Q+ + F I             TC++   +DVSS LDI +PT+V H+SHVTFDRF
Sbjct: 12  RGQSHNQNQNQFAILDILVAALKKSLVTCSVDR-EDVSS-LDISWPTEVRHVSHVTFDRF 69

Query: 290 NGFLG 304
           NGFLG
Sbjct: 70  NGFLG 74


>ref|XP_003521820.1| PREDICTED: rho GTPase-activating protein 25-like [Glycine max]
          Length = 422

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/68 (44%), Positives = 41/68 (60%)
 Frame = +2

Query: 101 ISPRHQGPAQSNHNFTIXXXXXXXXXXXXXTCTLHHSQDVSSSLDIGFPTDVHHLSHVTF 280
           ++P  +G    ++ F I             TC++   +DVSS LDI +PT+V H+SHVTF
Sbjct: 1   MNPGSKGHGCQSNQFAILDILVAALKKSLVTCSVER-EDVSS-LDISWPTEVRHVSHVTF 58

Query: 281 DRFNGFLG 304
           DRFNGFLG
Sbjct: 59  DRFNGFLG 66


>ref|XP_002880260.1| hypothetical protein ARALYDRAFT_483835 [Arabidopsis lyrata subsp.
           lyrata] gi|297326099|gb|EFH56519.1| hypothetical protein
           ARALYDRAFT_483835 [Arabidopsis lyrata subsp. lyrata]
          Length = 455

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 23/30 (76%), Positives = 29/30 (96%)
 Frame = +2

Query: 215 DVSSSLDIGFPTDVHHLSHVTFDRFNGFLG 304
           DV++S+DIG+PT+V H+SHVTFDRFNGFLG
Sbjct: 98  DVAASMDIGWPTEVKHVSHVTFDRFNGFLG 127


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