BLASTX nr result

ID: Atractylodes22_contig00049327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049327
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   131   2e-43
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    92   1e-30
ref|XP_004152903.1| PREDICTED: uncharacterized protein LOC101208...    87   4e-28
ref|XP_004164098.1| PREDICTED: uncharacterized protein LOC101232...    88   5e-25
ref|XP_004170075.1| PREDICTED: uncharacterized protein LOC101232...    85   8e-25

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  131 bits (330), Expect(2) = 2e-43
 Identities = 69/125 (55%), Positives = 88/125 (70%), Gaps = 6/125 (4%)
 Frame = +3

Query: 165 ISLKTMFRVLQK*---LLVELNHLQGSGMGPLNP---DVTVPVFLQETMNRFQRVLQLPE 326
           +SLK M R L+K    L +E N ++  G G +     +  +P FLQE M RF+ V + P 
Sbjct: 612 VSLKAMLRTLRKEGGGLWLECNQVEAGGAGSIRDSKVEQEIPPFLQELMRRFEGVFETPV 671

Query: 327 GLPPRRNKEHAIVLKQDQDPVLVRPYRYPQSQNNEIKRLVRDMLAAGIIQPSVSPFYSPM 506
           GLPPRR  EHAIVLK+  +PV VRPYRYPQ Q +EI+RL+++MLAAGIIQPS SPF SP+
Sbjct: 672 GLPPRRGHEHAIVLKEGSNPVGVRPYRYPQFQKDEIERLIKEMLAAGIIQPSTSPFSSPV 731

Query: 507 LLVKK 521
           +LVKK
Sbjct: 732 ILVKK 736



 Score = 69.3 bits (168), Expect(2) = 2e-43
 Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
 Frame = +2

Query: 5   GVQICDDFLPLALGNADVI*GIQWLEKPGTVTTNWKLQLMKFKVGKEKVTLKGD--IAKD 178
           G+ + +DFLPL LGN+DVI G+QWLE  GTV +NWK Q M F++G    TL GD  +A+ 
Sbjct: 551 GLVVVEDFLPLGLGNSDVILGVQWLETLGTVVSNWKTQKMSFQLGGVPYTLTGDPTLARS 610

Query: 179 HVS 187
            VS
Sbjct: 611 KVS 613


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 91.7 bits (226), Expect(2) = 1e-30
 Identities = 46/85 (54%), Positives = 61/85 (71%)
 Frame = +3

Query: 267  VPVFLQETMNRFQRVLQLPEGLPPRRNKEHAIVLKQDQDPVLVRPYRYPQSQNNEIKRLV 446
            VP  ++E + + Q++ +   GLPP R+ +HAI L     PV VRPYRYP    NEIKRLV
Sbjct: 1200 VPKTVKEVLAQHQQIFEPITGLPPSRDIDHAIQLILGASPVNVRPYRYPHILKNEIKRLV 1259

Query: 447  RDMLAAGIIQPSVSPFYSPMLLVKK 521
            ++ML AGI++PS+SPF SP+LLVKK
Sbjct: 1260 QEMLEAGIVRPSLSPFSSPVLLVKK 1284



 Score = 66.6 bits (161), Expect(2) = 1e-30
 Identities = 32/65 (49%), Positives = 40/65 (61%)
 Frame = +2

Query: 2    QGVQICDDFLPLALGNADVI*GIQWLEKPGTVTTNWKLQLMKFKVGKEKVTLKGDIAKDH 181
            QG+ + +DFLPL LGN DVI G+ WL   G V  NWK+  MK K+GK  + LKGD +   
Sbjct: 1125 QGLTVVEDFLPLELGNTDVILGMPWLGTLGDVKVNWKMLTMKIKMGKAVMVLKGDPSLSR 1184

Query: 182  VSRST 196
               ST
Sbjct: 1185 TETST 1189


>ref|XP_004152903.1| PREDICTED: uncharacterized protein LOC101208187 [Cucumis sativus]
          Length = 1969

 Score = 87.0 bits (214), Expect(2) = 4e-28
 Identities = 41/74 (55%), Positives = 53/74 (71%)
 Frame = +3

Query: 300  FQRVLQLPEGLPPRRNKEHAIVLKQDQDPVLVRPYRYPQSQNNEIKRLVRDMLAAGIIQP 479
            F+ V  +P  L P R  +H I LK+  DP+ VRPYRYP +Q NEI++LV +ML  GIIQP
Sbjct: 1070 FENVFNMPAELSPMRQVDHRIQLKEGTDPINVRPYRYPHAQKNEIEKLVNEMLDFGIIQP 1129

Query: 480  SVSPFYSPMLLVKK 521
            S+SPF S ++LVKK
Sbjct: 1130 SISPFSSLVILVKK 1143



 Score = 62.8 bits (151), Expect(2) = 4e-28
 Identities = 30/63 (47%), Positives = 38/63 (60%)
 Frame = +2

Query: 14   ICDDFLPLALGNADVI*GIQWLEKPGTVTTNWKLQLMKFKVGKEKVTLKGDIAKDHVSRS 193
            I +DFLPL LGN D++ G+ WL K G +T +WK   M F VG  K+ LKGD     +  S
Sbjct: 976  IVEDFLPLELGNLDMVLGMMWLRKQGAMTVDWKELAMTFVVGDSKIVLKGDPLLTRMEVS 1035

Query: 194  TKM 202
             KM
Sbjct: 1036 LKM 1038


>ref|XP_004164098.1| PREDICTED: uncharacterized protein LOC101232566 [Cucumis sativus]
          Length = 707

 Score = 87.8 bits (216), Expect(2) = 5e-25
 Identities = 44/87 (50%), Positives = 58/87 (66%)
 Frame = +3

Query: 261 VTVPVFLQETMNRFQRVLQLPEGLPPRRNKEHAIVLKQDQDPVLVRPYRYPQSQNNEIKR 440
           +TV   +      F+ V   PE LPPRR  EH I LK+  DPV VRPYRY   Q  E+++
Sbjct: 578 LTVEESVAVVFKSFEDVFDWPETLPPRRVIEHQIHLKKGTDPVNVRPYRYAYQQKTEMEK 637

Query: 441 LVRDMLAAGIIQPSVSPFYSPMLLVKK 521
           LV +MLA+G+I+PS SP+ SP+LLV+K
Sbjct: 638 LVEEMLASGVIRPSTSPYSSPVLLVRK 664



 Score = 51.6 bits (122), Expect(2) = 5e-25
 Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
 Frame = +2

Query: 11  QICDDFLPLALGNADVI*GIQWLEKPGTVTTNWKLQLMKFKVGKEKVTLKGD--IAKDHV 184
           ++ DDFLPL LG  D I G+QWL   G    +WK  ++ F    EKV ++GD  + K  V
Sbjct: 480 RVIDDFLPLELGGVDAILGMQWLYSLGITEVDWKNLILTFTHHGEKVVIRGDPSLTKARV 539

Query: 185 SRSTKMTVGG 214
           S    M   G
Sbjct: 540 SLKALMKSWG 549


>ref|XP_004170075.1| PREDICTED: uncharacterized protein LOC101232562, partial [Cucumis
           sativus]
          Length = 497

 Score = 85.1 bits (209), Expect(2) = 8e-25
 Identities = 42/83 (50%), Positives = 56/83 (67%)
 Frame = +3

Query: 261 VTVPVFLQETMNRFQRVLQLPEGLPPRRNKEHAIVLKQDQDPVLVRPYRYPQSQNNEIKR 440
           +TV   +   +  F+ V + PE LPPRR  EH I LK+  DPV VRPYRY   +  E++R
Sbjct: 228 LTVEESVAVVLKSFEDVFEWPETLPPRRVIEHQIHLKKGTDPVNVRPYRYAYQEKTEMER 287

Query: 441 LVRDMLAAGIIQPSVSPFYSPML 509
           LV +MLA+G+IQPS SP+ SP+L
Sbjct: 288 LVEEMLASGVIQPSTSPYSSPVL 310



 Score = 53.5 bits (127), Expect(2) = 8e-25
 Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
 Frame = +2

Query: 11  QICDDFLPLALGNADVI*GIQWLEKPGTVTTNWKLQLMKFKVGKEKVTLKGD--IAKDHV 184
           ++ DDFLPL LG+ D I G+QWL   G    +WK  ++ F    EK+ ++GD  + K  V
Sbjct: 130 RVIDDFLPLELGSVDAILGMQWLYSLGITEVDWKNLILTFTHHGEKIVIRGDPSLTKARV 189

Query: 185 SRSTKMTVGG 214
           S  T M   G
Sbjct: 190 SLKTLMKSWG 199


Top