BLASTX nr result

ID: Atractylodes22_contig00049292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049292
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABM55240.1| retrotransposon protein [Beta vulgaris]                160   1e-62
gb|AEV42258.1| hypothetical protein [Beta vulgaris]                   170   2e-59
gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]   152   2e-59
ref|XP_004153883.1| PREDICTED: uncharacterized protein LOC101208...   154   2e-59
gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]           161   3e-59

>gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
          Length = 1501

 Score =  160 bits (405), Expect(2) = 1e-62
 Identities = 73/103 (70%), Positives = 87/103 (84%)
 Frame = +2

Query: 350 GLAA*REVEFSVDLVPGAAPISKSLYRMAPTELKELKDQLTDILDKGYVRPSVSPWGAPV 529
           G+   R VEF++DLVPG APISK+ YRMAP E+ ELK QL ++LDKGY+RPS SPWGAPV
Sbjct: 541 GMPPARAVEFTIDLVPGTAPISKAPYRMAPPEMSELKTQLQELLDKGYIRPSASPWGAPV 600

Query: 530 LFMRNNDGSLRLCIDYRELNRLTIRNRYPLPRIDDLFDHLQGA 658
           LF++  DGS+RLCIDYRELN +TI+N+YPLPRIDDLFD L GA
Sbjct: 601 LFVKKKDGSMRLCIDYRELNNVTIKNKYPLPRIDDLFDQLNGA 643



 Score =  105 bits (263), Expect(2) = 1e-62
 Identities = 53/121 (43%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
 Frame = +3

Query: 3   PLLIGEKVWPVTLLPLEMRDFDLILGMNWLSKHQVTIDCEAKRVIFGNTSEPRQVLQGAT 182
           PL IG  V+P  L+   + D D+ILGMNWLS ++  IDCE ++V+  N S      +   
Sbjct: 424 PLKIGGSVFPSELIEFNLGDLDVILGMNWLSLYKARIDCEVQKVVLRNPSGKFTSYRRFG 483

Query: 183 PRRLDCIISALKARKLMDEGCKSFLATIQDMSKESP-NLESIAVVNEFPDVFPAELPGLP 359
             +   +ISAL+ +KLM +GC+ F  ++QD+SKE+   LE +++VNEF DVFP+E+ G+P
Sbjct: 484 KPKNFGVISALQVQKLMRKGCELFFCSVQDVSKEAELKLEDVSIVNEFMDVFPSEISGMP 543

Query: 360 P 362
           P
Sbjct: 544 P 544


>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
          Length = 1553

 Score =  170 bits (430), Expect(2) = 2e-59
 Identities = 76/105 (72%), Positives = 92/105 (87%)
 Frame = +2

Query: 347 PGLAA*REVEFSVDLVPGAAPISKSLYRMAPTELKELKDQLTDILDKGYVRPSVSPWGAP 526
           PG+   R+VEF+VDLVPG  PISK+ YRMAP E+ ELK+QL ++LDKGY+RPS+SPWGAP
Sbjct: 572 PGMPPRRDVEFTVDLVPGTGPISKATYRMAPAEMNELKNQLEELLDKGYIRPSMSPWGAP 631

Query: 527 VLFMRNNDGSLRLCIDYRELNRLTIRNRYPLPRIDDLFDHLQGAG 661
           VLF++  DGSLRLCIDYRELN +T++N+YPLPRIDDLFD LQGAG
Sbjct: 632 VLFVKKKDGSLRLCIDYRELNNVTVKNKYPLPRIDDLFDQLQGAG 676



 Score = 85.1 bits (209), Expect(2) = 2e-59
 Identities = 44/121 (36%), Positives = 71/121 (58%), Gaps = 1/121 (0%)
 Frame = +3

Query: 3   PLLIGEKVWPVTLLPLEMRDFDLILGMNWLSKHQVTIDCEAKRVIFGNTSEPRQVLQGAT 182
           PL IGE  +P  L+   + + D+ILGM+WL K+   IDC+A++V   + S  R V     
Sbjct: 457 PLKIGEGYFPSDLIEFNLSNLDIILGMDWLGKYMARIDCDAQKVELKDPSGKR-VSYRRI 515

Query: 183 PRRLDC-IISALKARKLMDEGCKSFLATIQDMSKESPNLESIAVVNEFPDVFPAELPGLP 359
           PR     +I+AL+ +  +D+G   F+ +++ +  +    E + +V EF DVFP E+PG+P
Sbjct: 516 PREPGIKVINALQLKNYVDKGWPLFMCSVRRVEDDPLRPEDVPIVREFQDVFPEEIPGMP 575

Query: 360 P 362
           P
Sbjct: 576 P 576


>gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
          Length = 1475

 Score =  152 bits (385), Expect(2) = 2e-59
 Identities = 68/104 (65%), Positives = 86/104 (82%)
 Frame = +2

Query: 347 PGLAA*REVEFSVDLVPGAAPISKSLYRMAPTELKELKDQLTDILDKGYVRPSVSPWGAP 526
           PGL   R+++F ++L PG  PIS   YRMAP ELKEL  QL D+L KG++RPSVSPWGAP
Sbjct: 656 PGLPPERDIDFPIELEPGTRPISIPPYRMAPAELKELSVQLQDLLGKGFIRPSVSPWGAP 715

Query: 527 VLFMRNNDGSLRLCIDYRELNRLTIRNRYPLPRIDDLFDHLQGA 658
           VLF++  DG++R+CIDYR+LN++T++NRYPLPRIDDLFD LQGA
Sbjct: 716 VLFVKKKDGTMRMCIDYRQLNKVTVKNRYPLPRIDDLFDQLQGA 759



 Score =  102 bits (254), Expect(2) = 2e-59
 Identities = 50/109 (45%), Positives = 74/109 (67%)
 Frame = +3

Query: 39  LLPLEMRDFDLILGMNWLSKHQVTIDCEAKRVIFGNTSEPRQVLQGATPRRLDCIISALK 218
           L+ L+M DFD+ILGM+WLS ++  +DC +K V       P  V QG+       +IS ++
Sbjct: 553 LILLDMVDFDVILGMDWLSPYRAVLDCFSKTVTLAIPGIPPVVWQGSRGSTPVGVISFIR 612

Query: 219 ARKLMDEGCKSFLATIQDMSKESPNLESIAVVNEFPDVFPAELPGLPPD 365
           AR+L+  GC S+LA ++D+S+E P +ES+ VV +F DVFP +LPGLPP+
Sbjct: 613 ARRLVASGCLSYLAYVRDVSREVPPVESVPVVRDFIDVFPTDLPGLPPE 661


>ref|XP_004153883.1| PREDICTED: uncharacterized protein LOC101208523, partial [Cucumis
           sativus]
          Length = 804

 Score =  154 bits (388), Expect(2) = 2e-59
 Identities = 70/104 (67%), Positives = 88/104 (84%)
 Frame = +2

Query: 347 PGLAA*REVEFSVDLVPGAAPISKSLYRMAPTELKELKDQLTDILDKGYVRPSVSPWGAP 526
           PGL   RE++F+++L P   PIS++ YRMAP ELKELK QL ++LDKG+++PSVS WGAP
Sbjct: 593 PGLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKGFIQPSVSSWGAP 652

Query: 527 VLFMRNNDGSLRLCIDYRELNRLTIRNRYPLPRIDDLFDHLQGA 658
           VLF++  DGS+RLCIDYRELN++TI+NRYPLPRIDDLFD LQ A
Sbjct: 653 VLFVKKKDGSMRLCIDYRELNKVTIKNRYPLPRIDDLFDQLQEA 696



 Score =  101 bits (251), Expect(2) = 2e-59
 Identities = 53/117 (45%), Positives = 75/117 (64%)
 Frame = +3

Query: 12  IGEKVWPVTLLPLEMRDFDLILGMNWLSKHQVTIDCEAKRVIFGNTSEPRQVLQGATPRR 191
           I  +V  VTLL L++RDFD+ILGM+ L+ +  +IDC  K V+F   +E     +G     
Sbjct: 481 IAGRVLDVTLLVLDIRDFDVILGMDLLATNHASIDCSRKEVVFSPPTESSFKFKGVGTVV 540

Query: 192 LDCIISALKARKLMDEGCKSFLATIQDMSKESPNLESIAVVNEFPDVFPAELPGLPP 362
           L  +ISA+KA KL+ +G  S LA++ D  ++  +L S  VV E+PDVFP +LPGLPP
Sbjct: 541 LPKVISAMKASKLLSQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPGLPP 597


>gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]
          Length = 1554

 Score =  161 bits (407), Expect(2) = 3e-59
 Identities = 72/104 (69%), Positives = 90/104 (86%)
 Frame = +2

Query: 347  PGLAA*REVEFSVDLVPGAAPISKSLYRMAPTELKELKDQLTDILDKGYVRPSVSPWGAP 526
            PG+   RE++F +DL+P   PIS   YRMAP+ELKELK+QL D+LDKG++RPSVSPWGAP
Sbjct: 723  PGIPPEREIDFGIDLIPDTHPISIPPYRMAPSELKELKEQLKDLLDKGFIRPSVSPWGAP 782

Query: 527  VLFMRNNDGSLRLCIDYRELNRLTIRNRYPLPRIDDLFDHLQGA 658
            VLF+R  DGSLR+CIDYR+LN++TI+N+YPLPRIDDLF+ LQGA
Sbjct: 783  VLFVRKKDGSLRMCIDYRQLNKVTIKNKYPLPRIDDLFNQLQGA 826



 Score = 93.6 bits (231), Expect(2) = 3e-59
 Identities = 50/121 (41%), Positives = 69/121 (57%)
 Frame = +3

Query: 3   PLLIGEKVWPVTLLPLEMRDFDLILGMNWLSKHQVTIDCEAKRVIFGNTSEPRQVLQGAT 182
           P  I  K     L+ L+M DFD+ILGMNWL     ++DC  + V F   +EP      ++
Sbjct: 608 PDSINHKSTMADLVELDMVDFDVILGMNWLHACYASLDCRTRVVKFQFPNEPVFEWSSSS 667

Query: 183 PRRLDCIISALKARKLMDEGCKSFLATIQDMSKESPNLESIAVVNEFPDVFPAELPGLPP 362
                  IS LKARKL+ +GC   L  + D S E P+ +S+ +V EFP VFP +LPG+PP
Sbjct: 668 AVPKGRFISYLKARKLVSKGCIYHLVRVHDSSVEIPHFQSVPIVREFPKVFPDDLPGIPP 727

Query: 363 D 365
           +
Sbjct: 728 E 728


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