BLASTX nr result

ID: Atractylodes22_contig00049253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049253
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   171   4e-41
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   166   1e-39
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   165   4e-39
emb|CAJ65876.1| putative integrase [Cucumis melo]                     163   2e-38
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...   162   3e-38

>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  171 bits (434), Expect = 4e-41
 Identities = 79/108 (73%), Positives = 92/108 (85%)
 Frame = -1

Query: 325  CEICQRNKSLSGHPAGLLQPLPVPFQVWEEVSMDFIEGLPKSNGMSSILVVVDRLSKYAH 146
            C +CQ+NK+ S  PAGLLQPLP+P  +WE+VSMDF+EGLPKS G  SILVVVDRLSKY H
Sbjct: 984  CAVCQQNKTSSLAPAGLLQPLPIPTLIWEDVSMDFVEGLPKSGGWDSILVVVDRLSKYGH 1043

Query: 145  FIGLKHPFSAQTVAECFVREVVRLHGVPNSIVSDRDKVFQSSFWKELF 2
            FIGL+HPFSA TVA+ F++EVV+LHG P +IVSDRDKVF S FWKELF
Sbjct: 1044 FIGLRHPFSAATVAQVFIKEVVKLHGFPTTIVSDRDKVFMSIFWKELF 1091


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  166 bits (421), Expect = 1e-39
 Identities = 76/111 (68%), Positives = 94/111 (84%)
 Frame = -1

Query: 334  VKCCEICQRNKSLSGHPAGLLQPLPVPFQVWEEVSMDFIEGLPKSNGMSSILVVVDRLSK 155
            V+ C+ICQ+ K+ +  PAGLLQPLP+P  +WE++SMDF+EGLPKS G  +ILVVVDRLSK
Sbjct: 1145 VQNCQICQQFKTSTLSPAGLLQPLPIPLAIWEDISMDFVEGLPKSQGWDTILVVVDRLSK 1204

Query: 154  YAHFIGLKHPFSAQTVAECFVREVVRLHGVPNSIVSDRDKVFQSSFWKELF 2
            YAHFI LKHPF+A TVA  F++E+V+LHG P++IVSDRDKVF S FWKELF
Sbjct: 1205 YAHFITLKHPFTAPTVAAVFIKEIVKLHGFPSTIVSDRDKVFMSLFWKELF 1255


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  165 bits (417), Expect = 4e-39
 Identities = 74/111 (66%), Positives = 93/111 (83%)
 Frame = -1

Query: 334  VKCCEICQRNKSLSGHPAGLLQPLPVPFQVWEEVSMDFIEGLPKSNGMSSILVVVDRLSK 155
            V+ C+ CQR K L+  P GLLQPLPVP ++WE++SMDFI GLPKS G  ++LVVVDRLSK
Sbjct: 904  VRSCDTCQRQKYLASSPGGLLQPLPVPDRIWEDLSMDFIMGLPKSKGYEAVLVVVDRLSK 963

Query: 154  YAHFIGLKHPFSAQTVAECFVREVVRLHGVPNSIVSDRDKVFQSSFWKELF 2
            Y+HFI LKHP++A+ +A+ F+REVVRLHG+P SIVSDRD +F S+FWKELF
Sbjct: 964  YSHFILLKHPYTAKVIADVFIREVVRLHGIPLSIVSDRDPIFMSNFWKELF 1014


>emb|CAJ65876.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  163 bits (412), Expect = 2e-38
 Identities = 75/108 (69%), Positives = 91/108 (84%)
 Frame = -1

Query: 325 CEICQRNKSLSGHPAGLLQPLPVPFQVWEEVSMDFIEGLPKSNGMSSILVVVDRLSKYAH 146
           C +CQ+NK+ +  PAGLLQPLP+P ++WE++SMDF+EGLP+S G  +ILVVVDRLSKYAH
Sbjct: 13  CHVCQQNKTQALSPAGLLQPLPIPNRIWEDISMDFVEGLPRSKGFDTILVVVDRLSKYAH 72

Query: 145 FIGLKHPFSAQTVAECFVREVVRLHGVPNSIVSDRDKVFQSSFWKELF 2
           FI L HPFSA+ VA  FV+EVVRLHG P SIVSDRD+VF S FW+ELF
Sbjct: 73  FITLGHPFSAKVVALVFVKEVVRLHGYPRSIVSDRDRVFLSHFWQELF 120


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score =  162 bits (410), Expect = 3e-38
 Identities = 72/111 (64%), Positives = 91/111 (81%)
 Frame = -1

Query: 334  VKCCEICQRNKSLSGHPAGLLQPLPVPFQVWEEVSMDFIEGLPKSNGMSSILVVVDRLSK 155
            +K C+ICQ NK  +  PAGLL PLP+P Q+W +VS+DF+EGLP SN  + ILVVVDRLSK
Sbjct: 1238 IKGCQICQENKYSTLSPAGLLSPLPIPQQIWSDVSLDFVEGLPSSNRFNCILVVVDRLSK 1297

Query: 154  YAHFIGLKHPFSAQTVAECFVREVVRLHGVPNSIVSDRDKVFQSSFWKELF 2
            Y+HFI LKHPF+A+TV E F+R+VV+LHG PN++VSDRD++F S FW ELF
Sbjct: 1298 YSHFIPLKHPFTAKTVVEAFIRDVVKLHGFPNTLVSDRDRIFLSGFWSELF 1348


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