BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049248
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containi...    40   3e-07
ref|NP_177842.1| pentatricopeptide repeat-containing protein [Ar...    46   5e-07
ref|XP_002889127.1| pentatricopeptide repeat-containing protein ...    46   4e-06
ref|XP_002514235.1| pentatricopeptide repeat-containing protein,...    36   5e-06
ref|XP_002332354.1| predicted protein [Populus trichocarpa] gi|2...    44   7e-06

>ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
           [Vitis vinifera] gi|297738768|emb|CBI28013.3| unnamed
           protein product [Vitis vinifera]
          Length = 479

 Score = 40.4 bits (93), Expect(3) = 3e-07
 Identities = 20/32 (62%), Positives = 23/32 (71%)
 Frame = +3

Query: 6   LGDLGLALQLHKCVFQAKSLHKLDISMSNSLV 101
           LG L LALQLHKCV+QAK+  + D    NSLV
Sbjct: 243 LGHLDLALQLHKCVYQAKTSERSDTLTLNSLV 274



 Score = 33.1 bits (74), Expect(3) = 3e-07
 Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
 Frame = +2

Query: 137 ERNVSSWMFLIVGYAMHRQTR-----WRCIR 214
           E NVSSW  +IVGYAMH Q       +RC+R
Sbjct: 295 EPNVSSWTSMIVGYAMHGQLYDALECFRCMR 325



 Score = 24.6 bits (52), Expect(3) = 3e-07
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 91  IHLYGKCGSMDLS 129
           + +YGKCG MDL+
Sbjct: 274 VDMYGKCGRMDLA 286


>ref|NP_177842.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122215262|sp|Q3ECB8.1|PP128_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g77170 gi|332197823|gb|AEE35944.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 467

 Score = 45.8 bits (107), Expect(3) = 5e-07
 Identities = 22/32 (68%), Positives = 24/32 (75%)
 Frame = +3

Query: 6   LGDLGLALQLHKCVFQAKSLHKLDISMSNSLV 101
           LGDL LA QLHKCV QAK+  K DI M NSL+
Sbjct: 231 LGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLI 262



 Score = 26.6 bits (57), Expect(3) = 5e-07
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 137 ERNVSSWMFLIVGYAMHRQT 196
           +RNV SW  +IVGYA +  T
Sbjct: 283 QRNVVSWSSMIVGYAANGNT 302



 Score = 25.0 bits (53), Expect(3) = 5e-07
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 91  IHLYGKCGSMDLS 129
           I +YGKCG MDL+
Sbjct: 262 IDMYGKCGRMDLA 274


>ref|XP_002889127.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334968|gb|EFH65386.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 466

 Score = 45.8 bits (107), Expect(3) = 4e-06
 Identities = 21/32 (65%), Positives = 24/32 (75%)
 Frame = +3

Query: 6   LGDLGLALQLHKCVFQAKSLHKLDISMSNSLV 101
           LGDL LA QLHKCV QAK+  K D+ M NSL+
Sbjct: 230 LGDLNLAFQLHKCVLQAKTEEKSDVMMMNSLI 261



 Score = 25.0 bits (53), Expect(3) = 4e-06
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 137 ERNVSSWMFLIVGYAMHRQT 196
           +RNV SW  +I GYA +  T
Sbjct: 282 QRNVVSWSSMITGYAANGNT 301



 Score = 23.5 bits (49), Expect(3) = 4e-06
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 91  IHLYGKCGSMDLS 129
           I +YGKCG MD +
Sbjct: 261 IDMYGKCGRMDFA 273


>ref|XP_002514235.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546691|gb|EEF48189.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 352

 Score = 35.8 bits (81), Expect(3) = 5e-06
 Identities = 17/32 (53%), Positives = 22/32 (68%)
 Frame = +3

Query: 6   LGDLGLALQLHKCVFQAKSLHKLDISMSNSLV 101
           LGDL LA+QLHK VF A    + +I + NSL+
Sbjct: 237 LGDLNLAIQLHKYVFHANVFGRTNILVMNSLI 268



 Score = 31.2 bits (69), Expect(3) = 5e-06
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +2

Query: 137 ERNVSSWMFLIVGYAMH 187
           E+NVSSW  +IVGY MH
Sbjct: 289 EKNVSSWTSMIVGYGMH 305



 Score = 26.9 bits (58), Expect(3) = 5e-06
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +1

Query: 91  IHLYGKCGSMDLSR 132
           I +YGKCG MDL+R
Sbjct: 268 IDMYGKCGRMDLAR 281


>ref|XP_002332354.1| predicted protein [Populus trichocarpa] gi|222832075|gb|EEE70552.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score = 43.9 bits (102), Expect(3) = 7e-06
 Identities = 23/32 (71%), Positives = 25/32 (78%)
 Frame = +3

Query: 6   LGDLGLALQLHKCVFQAKSLHKLDISMSNSLV 101
           LGDL LALQLHK VFQAKS  K D+ M NSL+
Sbjct: 190 LGDLHLALQLHKYVFQAKSFVKPDMLMLNSLI 221



 Score = 26.2 bits (56), Expect(3) = 7e-06
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 91  IHLYGKCGSMDLSRM 135
           I +YGKCG MDL+ M
Sbjct: 221 IDMYGKCGRMDLAYM 235



 Score = 23.5 bits (49), Expect(3) = 7e-06
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 137 ERNVSSWMFLIVG 175
           +RNVSSW  +IVG
Sbjct: 242 QRNVSSWTSMIVG 254