BLASTX nr result

ID: Atractylodes22_contig00049244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049244
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001837383.1| ribosomal protein L20 [Guizotia abyssinica] ...   210   1e-52
ref|YP_004564395.1| ribosomal protein L20 (chloroplast) [Agerati...   210   2e-52
ref|YP_398352.1| ribosomal protein L20 [Lactuca sativa] gi|12221...   209   4e-52
ref|YP_588140.1| ribosomal protein L20 [Helianthus annuus] gi|12...   209   4e-52
ref|YP_003330981.1| ribosomal protein L20 [Parthenium argentatum...   207   1e-51

>ref|YP_001837383.1| ribosomal protein L20 [Guizotia abyssinica]
           gi|441403315|ref|YP_007353789.1| ribosomal protein L20
           (chloroplast) [Chrysanthemum x morifolium]
           gi|452849074|ref|YP_007474752.1| ribosomal protein L20
           (chloroplast) [Chrysanthemum indicum]
           gi|215274703|sp|B2LML6.1|RK20_GUIAB RecName: Full=50S
           ribosomal protein L20, chloroplastic
           gi|179366279|gb|ACB86550.1| ribosomal protein L20
           [Guizotia abyssinica] gi|372863229|gb|AEX99301.1|
           ribosomal protein L20 (chloroplast) [Chrysanthemum
           indicum] gi|372863468|gb|AEX99537.1| ribosomal protein
           L20 (chloroplast) [Chrysanthemum indicum]
           gi|375298858|gb|AFA45297.1| ribosomal protein L20
           (chloroplast) [Chrysanthemum x morifolium]
          Length = 126

 Score =  210 bits (535), Expect = 1e-52
 Identities = 106/107 (99%), Positives = 106/107 (99%)
 Frame = -1

Query: 333 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKINFRRLWITRINAAIRERGVCYSY 154
           LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKINFRRLWITRINAAIRERGVCYSY
Sbjct: 19  LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKINFRRLWITRINAAIRERGVCYSY 78

Query: 153 SRLINDLYKRQLLLNRKILAQIAISNRNCLYMISNEIIKEVGWKEST 13
           SRLINDLYKRQLLLNRKILAQIAISNRNCLYMISNEIIKEV WKEST
Sbjct: 79  SRLINDLYKRQLLLNRKILAQIAISNRNCLYMISNEIIKEVSWKEST 125


>ref|YP_004564395.1| ribosomal protein L20 (chloroplast) [Ageratina adenophora]
           gi|334089696|gb|AEG64579.1| ribosomal protein L20
           (chloroplast) [Ageratina adenophora]
          Length = 126

 Score =  210 bits (534), Expect = 2e-52
 Identities = 105/107 (98%), Positives = 106/107 (99%)
 Frame = -1

Query: 333 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKINFRRLWITRINAAIRERGVCYSY 154
           LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKINFRRLWITRINAAIRERGVCYSY
Sbjct: 19  LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKINFRRLWITRINAAIRERGVCYSY 78

Query: 153 SRLINDLYKRQLLLNRKILAQIAISNRNCLYMISNEIIKEVGWKEST 13
           SRLINDLYKRQLLLNRKILAQIAISNRNCLYMISNEIIKE+ WKEST
Sbjct: 79  SRLINDLYKRQLLLNRKILAQIAISNRNCLYMISNEIIKEISWKEST 125


>ref|YP_398352.1| ribosomal protein L20 [Lactuca sativa]
           gi|122212018|sp|Q332V5.1|RK20_LACSA RecName: Full=50S
           ribosomal protein L20, chloroplastic
           gi|78675191|dbj|BAE47617.1| ribosomal protein L20
           [Lactuca sativa] gi|88657006|gb|ABD47256.1| ribosomal
           protein L20 [Lactuca sativa]
          Length = 126

 Score =  209 bits (531), Expect = 4e-52
 Identities = 105/107 (98%), Positives = 106/107 (99%)
 Frame = -1

Query: 333 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKINFRRLWITRINAAIRERGVCYSY 154
           LFASSFRGAHSRLTRTITQQKIRALVSAHRDRD+QKINFRRLWITRINAAIRERGVCYSY
Sbjct: 19  LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKINFRRLWITRINAAIRERGVCYSY 78

Query: 153 SRLINDLYKRQLLLNRKILAQIAISNRNCLYMISNEIIKEVGWKEST 13
           SRLIN LYKRQLLLNRKILAQIAISNRNCLYMISNEIIKEVGWKEST
Sbjct: 79  SRLINGLYKRQLLLNRKILAQIAISNRNCLYMISNEIIKEVGWKEST 125


>ref|YP_588140.1| ribosomal protein L20 [Helianthus annuus]
           gi|122179560|sp|Q1KXT6.1|RK20_HELAN RecName: Full=50S
           ribosomal protein L20, chloroplastic
           gi|88656918|gb|ABD47169.1| ribosomal protein L20
           [Helianthus annuus]
          Length = 126

 Score =  209 bits (531), Expect = 4e-52
 Identities = 105/107 (98%), Positives = 105/107 (98%)
 Frame = -1

Query: 333 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKINFRRLWITRINAAIRERGVCYSY 154
           LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKINFRRLWITRINAAIRERGVCYSY
Sbjct: 19  LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKINFRRLWITRINAAIRERGVCYSY 78

Query: 153 SRLINDLYKRQLLLNRKILAQIAISNRNCLYMISNEIIKEVGWKEST 13
           SR INDLYKRQLLLNRKILAQIAISNRNCLYMISNEIIKEV WKEST
Sbjct: 79  SRFINDLYKRQLLLNRKILAQIAISNRNCLYMISNEIIKEVSWKEST 125


>ref|YP_003330981.1| ribosomal protein L20 [Parthenium argentatum]
           gi|269924857|gb|ACZ52730.1| ribosomal protein L20
           [Parthenium argentatum]
          Length = 126

 Score =  207 bits (526), Expect = 1e-51
 Identities = 104/107 (97%), Positives = 105/107 (98%)
 Frame = -1

Query: 333 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKINFRRLWITRINAAIRERGVCYSY 154
           LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKI+FRRLWITRINAAIRERGVCYSY
Sbjct: 19  LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKIHFRRLWITRINAAIRERGVCYSY 78

Query: 153 SRLINDLYKRQLLLNRKILAQIAISNRNCLYMISNEIIKEVGWKEST 13
           SR INDLYKRQLLLNRKILAQIAISNRNCLYMISNEIIKEV WKEST
Sbjct: 79  SRFINDLYKRQLLLNRKILAQIAISNRNCLYMISNEIIKEVSWKEST 125


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