BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049215
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA22288.1| polyprotein [Oryza australiensis]                     142   2e-32
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   142   3e-32
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...   141   6e-32
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]        139   2e-31
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   137   1e-30

>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  142 bits (359), Expect = 2e-32
 Identities = 62/105 (59%), Positives = 84/105 (80%), Gaps = 2/105 (1%)
 Frame = +3

Query: 9   KRLKNDLSNSYLWHCRLGHINKTRIAKLQSDGILESCD-DSYDVCESCLLGKMTKAPFKG 185
           ++L ND++ +++WHCRLGHINK R+ KL  DG+L S D +S++ CESCLLGKMTKAPF G
Sbjct: 428 RQLSNDINPTFIWHCRLGHINKKRMEKLHKDGLLHSFDFESFETCESCLLGKMTKAPFTG 487

Query: 186 KPERAKELLEIIYTDVCS-LNAATRNGHHYFVTFTDDFSRYGYVY 317
             ERA +LL +++TDVC  +++  R G+ YF+TFTDDFSRYGY+Y
Sbjct: 488 HSERASDLLALVHTDVCGPMSSTARGGYQYFITFTDDFSRYGYIY 532


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  142 bits (358), Expect = 3e-32
 Identities = 68/107 (63%), Positives = 84/107 (78%), Gaps = 3/107 (2%)
 Frame = +3

Query: 6   TKRLK-NDLSNSYLWHCRLGHINKTRIAKLQSDGILESCD-DSYDVCESCLLGKMTKAPF 179
           TK+ K NDL+ ++LWHCRLGHIN+  I KL SDG+L S D +SY+ CESCLLGKMTKAPF
Sbjct: 70  TKKFKSNDLNPTFLWHCRLGHINEKHIQKLHSDGLLNSFDYESYETCESCLLGKMTKAPF 129

Query: 180 KGKPERAKELLEIIYTDVCS-LNAATRNGHHYFVTFTDDFSRYGYVY 317
            G  ERA +LL +I+TDVC  ++ + R  + YF+TFTDDFSRYGYVY
Sbjct: 130 TGHSERASDLLGLIHTDVCGPMSTSARGNYQYFITFTDDFSRYGYVY 176


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 829

 Score =  141 bits (355), Expect = 6e-32
 Identities = 64/105 (60%), Positives = 84/105 (80%), Gaps = 2/105 (1%)
 Frame = +3

Query: 9   KRLKNDLSNSYLWHCRLGHINKTRIAKLQSDGILESCD-DSYDVCESCLLGKMTKAPFKG 185
           ++L NDL+ +++WHCRLGHIN+ R+ KL  DG+L S D +S++ CESCLLGKMTKAPF G
Sbjct: 372 RQLPNDLNPTFIWHCRLGHINEKRMKKLHRDGLLHSFDFESFETCESCLLGKMTKAPFTG 431

Query: 186 KPERAKELLEIIYTDVCS-LNAATRNGHHYFVTFTDDFSRYGYVY 317
           + ERA ELL +++TDVC  +++  R G  YF+TFTDDFSRYGYVY
Sbjct: 432 QSERASELLGLVHTDVCGPMSSTARGGFGYFITFTDDFSRYGYVY 476


>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
          Length = 948

 Score =  139 bits (351), Expect = 2e-31
 Identities = 63/101 (62%), Positives = 82/101 (81%), Gaps = 2/101 (1%)
 Frame = +3

Query: 21  NDLSNSYLWHCRLGHINKTRIAKLQSDGILESCD-DSYDVCESCLLGKMTKAPFKGKPER 197
           NDL+ +++WHCRLGHIN+ R+ KL  DG+L S D +S++ CESCLLGKMTKAPF G+ ER
Sbjct: 427 NDLNPTFIWHCRLGHINEKRMEKLHRDGLLHSFDFESFETCESCLLGKMTKAPFTGQSER 486

Query: 198 AKELLEIIYTDVCS-LNAATRNGHHYFVTFTDDFSRYGYVY 317
           A ELL +++TDVC  +++  R+G  YF+TFTDDFSRYGYVY
Sbjct: 487 ASELLALVHTDVCGPMSSTARSGFGYFITFTDDFSRYGYVY 527


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score =  137 bits (344), Expect = 1e-30
 Identities = 62/101 (61%), Positives = 80/101 (79%), Gaps = 2/101 (1%)
 Frame = +3

Query: 21  NDLSNSYLWHCRLGHINKTRIAKLQSDGILESCD-DSYDVCESCLLGKMTKAPFKGKPER 197
           NDL+ +++WHCRLGHIN+ R+ K+  DG+L S D +S++ CESCLLGKMTKAPF G+ ER
Sbjct: 408 NDLNPTFIWHCRLGHINEKRMEKIHRDGLLHSFDFESFETCESCLLGKMTKAPFTGQSER 467

Query: 198 AKELLEIIYTDVCS-LNAATRNGHHYFVTFTDDFSRYGYVY 317
           A ELL +++TDVC  +++  R G  YF TFTDDFSRYGYVY
Sbjct: 468 ASELLALVHTDVCGPMSSTARGGFGYFFTFTDDFSRYGYVY 508