BLASTX nr result

ID: Atractylodes22_contig00049194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049194
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36837.3| unnamed protein product [Vitis vinifera]              288   6e-76
ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2...   288   6e-76
ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [...   284   1e-74
ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|2...   277   1e-72
ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2...   275   4e-72

>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  288 bits (737), Expect = 6e-76
 Identities = 147/171 (85%), Positives = 156/171 (91%)
 Frame = -1

Query: 514 DGVASSVITSPSIKPINKSAVHRICSGQVILDLPSAVKELVENSLDAGATSIEVALKEYG 335
           +G A S   SP+I+ INK AVHRICSGQVILDL SAVKELVENSLDAGATSIE+ALKEYG
Sbjct: 2   EGAAQS--ESPTIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYG 59

Query: 334 EESFQVIDNGCGISPNNFKVLALKHHTSKLTDFPDLQSLTTFGFRGEALSSLCNLGELTV 155
           +E FQVIDNGCGISPNNFKVLALKHHTSKL DFPDLQSLTTFGFRGEALSSLC LG LTV
Sbjct: 60  QEWFQVIDNGCGISPNNFKVLALKHHTSKLIDFPDLQSLTTFGFRGEALSSLCALGNLTV 119

Query: 154 ETRAKSEQVATHLTFDHSGLLTDERKTARQVGTTVTVEKLFSNLPVRSKEF 2
           ETR K+E VATHLTFDHSGLL DE+KTARQ+GTTVTV+KLFSNLPVRSKEF
Sbjct: 120 ETRTKNESVATHLTFDHSGLLRDEKKTARQIGTTVTVKKLFSNLPVRSKEF 170


>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
          Length = 937

 Score =  288 bits (737), Expect = 6e-76
 Identities = 147/171 (85%), Positives = 156/171 (91%)
 Frame = -1

Query: 514 DGVASSVITSPSIKPINKSAVHRICSGQVILDLPSAVKELVENSLDAGATSIEVALKEYG 335
           +G A S   SP+I+ INK AVHRICSGQVILDL SAVKELVENSLDAGATSIE+ALKEYG
Sbjct: 2   EGAAQS--ESPTIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYG 59

Query: 334 EESFQVIDNGCGISPNNFKVLALKHHTSKLTDFPDLQSLTTFGFRGEALSSLCNLGELTV 155
           +E FQVIDNGCGISPNNFKVLALKHHTSKL DFPDLQSLTTFGFRGEALSSLC LG LTV
Sbjct: 60  QEWFQVIDNGCGISPNNFKVLALKHHTSKLIDFPDLQSLTTFGFRGEALSSLCALGNLTV 119

Query: 154 ETRAKSEQVATHLTFDHSGLLTDERKTARQVGTTVTVEKLFSNLPVRSKEF 2
           ETR K+E VATHLTFDHSGLL DE+KTARQ+GTTVTV+KLFSNLPVRSKEF
Sbjct: 120 ETRTKNESVATHLTFDHSGLLRDEKKTARQIGTTVTVKKLFSNLPVRSKEF 170


>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
           gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
           pms2, putative [Ricinus communis]
          Length = 924

 Score =  284 bits (726), Expect = 1e-74
 Identities = 140/165 (84%), Positives = 153/165 (92%)
 Frame = -1

Query: 496 VITSPSIKPINKSAVHRICSGQVILDLPSAVKELVENSLDAGATSIEVALKEYGEESFQV 317
           +  SP IKPINK  VHRIC+GQVILDL SAVKELVENSLDAGATSIE++LK+YGE+SFQV
Sbjct: 3   ISNSPIIKPINKGVVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEDSFQV 62

Query: 316 IDNGCGISPNNFKVLALKHHTSKLTDFPDLQSLTTFGFRGEALSSLCNLGELTVETRAKS 137
           IDNGCG+SPNNFKVLALKHHTSKL DFPDLQSLTTFGFRGEALSSLC LGELTVETR K+
Sbjct: 63  IDNGCGVSPNNFKVLALKHHTSKLADFPDLQSLTTFGFRGEALSSLCALGELTVETRTKN 122

Query: 136 EQVATHLTFDHSGLLTDERKTARQVGTTVTVEKLFSNLPVRSKEF 2
           E VATHL++D SGLLT E+KTARQ+GTTVTV+KLFSNLPVRSKEF
Sbjct: 123 ESVATHLSYDRSGLLTAEKKTARQIGTTVTVKKLFSNLPVRSKEF 167


>ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|222861786|gb|EEE99328.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  277 bits (709), Expect = 1e-72
 Identities = 143/167 (85%), Positives = 155/167 (92%)
 Frame = -1

Query: 502 SSVITSPSIKPINKSAVHRICSGQVILDLPSAVKELVENSLDAGATSIEVALKEYGEESF 323
           SS IT   I+PINK+AVHRIC+GQVILDL SAVKELVENSLDAGATSIE++LK+YG ESF
Sbjct: 3   SSAIT---IRPINKAAVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGLESF 59

Query: 322 QVIDNGCGISPNNFKVLALKHHTSKLTDFPDLQSLTTFGFRGEALSSLCNLGELTVETRA 143
           QVIDNGCG+SPNNFKVLALKHHTSKL DF DLQSLTTFGFRGEALSSLC LG+LTVETR 
Sbjct: 60  QVIDNGCGVSPNNFKVLALKHHTSKLGDFHDLQSLTTFGFRGEALSSLCVLGDLTVETRT 119

Query: 142 KSEQVATHLTFDHSGLLTDERKTARQVGTTVTVEKLFSNLPVRSKEF 2
           K+E VATHLTF+HSGLLT ERKTARQVGTTVTV+KLFS+LPVRSKEF
Sbjct: 120 KNEPVATHLTFNHSGLLTAERKTARQVGTTVTVKKLFSSLPVRSKEF 166


>ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2-like [Cucumis sativus]
           gi|449498483|ref|XP_004160549.1| PREDICTED: mismatch
           repair endonuclease PMS2-like [Cucumis sativus]
          Length = 921

 Score =  275 bits (704), Expect = 4e-72
 Identities = 137/164 (83%), Positives = 151/164 (92%)
 Frame = -1

Query: 493 ITSPSIKPINKSAVHRICSGQVILDLPSAVKELVENSLDAGATSIEVALKEYGEESFQVI 314
           + SP+IKPINK  VHRIC+GQVILDL SAVKELVENSLDAGATSIE++LK+YGEE FQVI
Sbjct: 7   VDSPAIKPINKGIVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEEWFQVI 66

Query: 313 DNGCGISPNNFKVLALKHHTSKLTDFPDLQSLTTFGFRGEALSSLCNLGELTVETRAKSE 134
           DNG GISP NF+VLALKHHTSKL+DFPDLQSLTT+GFRGEALSSLC+LG LTVET+ K+E
Sbjct: 67  DNGSGISPTNFRVLALKHHTSKLSDFPDLQSLTTYGFRGEALSSLCSLGTLTVETKTKNE 126

Query: 133 QVATHLTFDHSGLLTDERKTARQVGTTVTVEKLFSNLPVRSKEF 2
            VATHLTFDHSGLL  E+KTARQVGTTV V+KLFSNLPVRSKEF
Sbjct: 127 SVATHLTFDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEF 170


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