BLASTX nr result

ID: Atractylodes22_contig00049130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049130
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322810.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi...   148   5e-34
emb|CBI28813.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi...   142   2e-32

>ref|XP_002322810.1| predicted protein [Populus trichocarpa] gi|222867440|gb|EEF04571.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/110 (65%), Positives = 90/110 (81%)
 Frame = +1

Query: 4   FCMRDKSHPDSKEIDLYLKKLIAEMKLLGYKPDTSSILHNMNLEEKEDELVHHSEKLAIA 183
           F M DKSHP S+EIDLYLK+L+ EMKL GY PDT+++ H+ + EEKE+ LV+HSEKLAIA
Sbjct: 442 FSMGDKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIA 501

Query: 184 FGLIKTSPGTPIRISKNLRVCTDYHDATKMISKVYNREIIVRDRTRFHHF 333
           FGL+   PG+PIR+ KNLR+C+D H A K+IS + NREIIVRD +RFHHF
Sbjct: 502 FGLMNIPPGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSRFHHF 551


>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  148 bits (373), Expect = 5e-34
 Identities = 72/110 (65%), Positives = 86/110 (78%)
 Frame = +1

Query: 4   FCMRDKSHPDSKEIDLYLKKLIAEMKLLGYKPDTSSILHNMNLEEKEDELVHHSEKLAIA 183
           FCM DKSHP S EI  YL++L +EMK  GY PD  S+LH+M++E+KE  LVHHSEKLAIA
Sbjct: 537 FCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIA 596

Query: 184 FGLIKTSPGTPIRISKNLRVCTDYHDATKMISKVYNREIIVRDRTRFHHF 333
           F L+ T  GTPIR+ KNLRVC+D H A K IS++ NREIIVRD +RFHHF
Sbjct: 597 FALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHF 646


>emb|CBI28813.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score =  145 bits (366), Expect = 3e-33
 Identities = 72/110 (65%), Positives = 82/110 (74%)
 Frame = +1

Query: 4   FCMRDKSHPDSKEIDLYLKKLIAEMKLLGYKPDTSSILHNMNLEEKEDELVHHSEKLAIA 183
           F   D SHP  + I   L ++  E+K  GYKPDT  +L +M+ EEKE  L HHSEKLAIA
Sbjct: 380 FVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIA 439

Query: 184 FGLIKTSPGTPIRISKNLRVCTDYHDATKMISKVYNREIIVRDRTRFHHF 333
           FGLIKT PGT IRI+KNLRVC D H ATK+ISK+YNREIIVRDR RFHHF
Sbjct: 440 FGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHF 489


>ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 640

 Score =  145 bits (366), Expect = 3e-33
 Identities = 72/110 (65%), Positives = 82/110 (74%)
 Frame = +1

Query: 4   FCMRDKSHPDSKEIDLYLKKLIAEMKLLGYKPDTSSILHNMNLEEKEDELVHHSEKLAIA 183
           F   D SHP  + I   L ++  E+K  GYKPDT  +L +M+ EEKE  L HHSEKLAIA
Sbjct: 520 FVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIA 579

Query: 184 FGLIKTSPGTPIRISKNLRVCTDYHDATKMISKVYNREIIVRDRTRFHHF 333
           FGLIKT PGT IRI+KNLRVC D H ATK+ISK+YNREIIVRDR RFHHF
Sbjct: 580 FGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHF 629


>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
           gi|449526872|ref|XP_004170437.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/110 (62%), Positives = 83/110 (75%)
 Frame = +1

Query: 4   FCMRDKSHPDSKEIDLYLKKLIAEMKLLGYKPDTSSILHNMNLEEKEDELVHHSEKLAIA 183
           F M DKSHP   EIDLYLK+L++E+K  GY P+  S+LH+M+ EEKE  L HHSEK AIA
Sbjct: 547 FSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIA 606

Query: 184 FGLIKTSPGTPIRISKNLRVCTDYHDATKMISKVYNREIIVRDRTRFHHF 333
           F L+ TS   PIR+ KNLRVC D H+A K IS++ NREIIVRD +RFHHF
Sbjct: 607 FALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHF 656


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