BLASTX nr result

ID: Atractylodes22_contig00049083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049083
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_005352893.1| unnamed protein product [Centrosema yellow s...   126   2e-27
gb|AAT67156.1| AC1 protein [Papaya leaf curl China virus-Guangzh...   120   9e-26
ref|YP_006437.1| AC1 protein [Papaya leaf curl Guandong virus] g...   120   9e-26
emb|CBH28932.1| replication-associated protein [Sida micrantha m...   120   1e-25
sp|P14991.2|REP_BCTVC RecName: Full=Replication-associated prote...   120   1e-25

>ref|YP_005352893.1| unnamed protein product [Centrosema yellow spot virus]
           gi|380448863|gb|AFD54475.1| replication-associated
           protein [Centrosema yellow spot virus]
          Length = 359

 Score =  126 bits (316), Expect = 2e-27
 Identities = 63/77 (81%), Positives = 67/77 (87%), Gaps = 1/77 (1%)
 Frame = -3

Query: 300 DGSPHLHVLIQLEGRAQITNQRLFDLFSPFISKTFHPNIQGAKSSS-VKSYIEKDGDYKD 124
           DG PHLHVLIQLEG+AQITNQRLFDL SP  S  FHPNIQGAKSSS VKSYI+KDGD  +
Sbjct: 54  DGQPHLHVLIQLEGKAQITNQRLFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLE 113

Query: 123 WGEFQIDGRSARGGKHT 73
           WGEFQIDGRSARGG+ T
Sbjct: 114 WGEFQIDGRSARGGQQT 130


>gb|AAT67156.1| AC1 protein [Papaya leaf curl China virus-Guangzhou isolate]
          Length = 362

 Score =  120 bits (302), Expect = 9e-26
 Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
 Frame = -3

Query: 300 DGSPHLHVLIQLEGRAQITNQRLFDLFSPFISKTFHPNIQGAKSSS-VKSYIEKDGDYKD 124
           DGSPHLHVLIQ EG+ + TNQR FDL SP  S  FHPNIQGAKSSS VKSY+EKDGD  D
Sbjct: 53  DGSPHLHVLIQFEGKFRCTNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYLEKDGDTLD 112

Query: 123 WGEFQIDGRSARGGKHT 73
           WGEFQIDGRSARGG+ T
Sbjct: 113 WGEFQIDGRSARGGQQT 129


>ref|YP_006437.1| AC1 protein [Papaya leaf curl Guandong virus]
           gi|40644625|emb|CAD90096.1| AC1 protein [Papaya leaf
           curl Guangdong virus - [GD2]]
          Length = 362

 Score =  120 bits (302), Expect = 9e-26
 Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
 Frame = -3

Query: 300 DGSPHLHVLIQLEGRAQITNQRLFDLFSPFISKTFHPNIQGAKSSS-VKSYIEKDGDYKD 124
           DGSPHLHVLIQ EG+ + TNQR FDL SP  S  FHPNIQGAKSSS VKSY+EKDGD  D
Sbjct: 53  DGSPHLHVLIQFEGKFRCTNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYLEKDGDTLD 112

Query: 123 WGEFQIDGRSARGGKHT 73
           WGEFQIDGRSARGG+ T
Sbjct: 113 WGEFQIDGRSARGGQQT 129


>emb|CBH28932.1| replication-associated protein [Sida micrantha mosaic virus]
          Length = 359

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/77 (74%), Positives = 65/77 (84%), Gaps = 1/77 (1%)
 Frame = -3

Query: 300 DGSPHLHVLIQLEGRAQITNQRLFDLFSPFISKTFHPNIQGAKSSS-VKSYIEKDGDYKD 124
           DG PHLH+L+QLEG+ Q+TN RLFDL SP  S  FHPNIQGAKSSS VKSYI+KDGD  +
Sbjct: 54  DGQPHLHILLQLEGKIQVTNNRLFDLVSPNRSARFHPNIQGAKSSSDVKSYIDKDGDTVE 113

Query: 123 WGEFQIDGRSARGGKHT 73
           WGEFQ+DGRSARGG+ T
Sbjct: 114 WGEFQVDGRSARGGQQT 130


>sp|P14991.2|REP_BCTVC RecName: Full=Replication-associated protein; Short=Rep; AltName:
           Full=40.8 kDa protein; AltName: Full=Protein C1
           gi|14290115|gb|AAK59260.1|AF379637_5 Rep [Beet curly top
           virus - California [Logan/Arabidopsis]]
          Length = 358

 Score =  120 bits (300), Expect = 1e-25
 Identities = 59/77 (76%), Positives = 65/77 (84%), Gaps = 1/77 (1%)
 Frame = -3

Query: 300 DGSPHLHVLIQLEGRAQITNQRLFDLFSPFISKTFHPNIQGAKSSS-VKSYIEKDGDYKD 124
           DG PHLHVL+QLEG+ QITN RLFDL SP  S  FHPNIQGAKSSS VKSY++KDGD  +
Sbjct: 53  DGQPHLHVLLQLEGKVQITNIRLFDLVSPTRSAHFHPNIQGAKSSSDVKSYVDKDGDTIE 112

Query: 123 WGEFQIDGRSARGGKHT 73
           WGEFQIDGRSARGG+ T
Sbjct: 113 WGEFQIDGRSARGGQQT 129


Top