BLASTX nr result
ID: Atractylodes22_contig00049068
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00049068 (305 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus comm... 61 8e-08 ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera... 55 5e-06 emb|CBI20904.3| unnamed protein product [Vitis vinifera] 55 5e-06 >ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus communis] gi|223544402|gb|EEF45923.1| DNA polymerase theta, putative [Ricinus communis] Length = 2154 Score = 61.2 bits (147), Expect = 8e-08 Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 4/104 (3%) Frame = +2 Query: 5 EQVEC-SITDKNPTTVHMSTPCNQVQSLSKL---QETTSSCVITKRRVDVLNQPNDNRTS 172 EQ EC S+ K T ++T CN+VQ+ ++ Q+T S +TKR D+L Q D+ Sbjct: 395 EQSECGSVNIKCIRTGKIAT-CNEVQTKEEMHDVQKTESIYAMTKREADLLLQYTDSIMP 453 Query: 173 NTPGTDIKGSNANYPNSIESTPSSSLPPNDRLDISSWLPSELCN 304 N+P +I+ A+ + TPSS +P DRLD+ +WLP+E+C+ Sbjct: 454 NSPINEIRNPVASAYGEAD-TPSSFVPLKDRLDLVNWLPAEVCS 496 >ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis vinifera] Length = 2181 Score = 55.5 bits (132), Expect = 5e-06 Identities = 30/74 (40%), Positives = 42/74 (56%) Frame = +2 Query: 83 LSKLQETTSSCVITKRRVDVLNQPNDNRTSNTPGTDIKGSNANYPNSIESTPSSSLPPND 262 +S++++ S KR VD+L+Q DN +++P I S STPSS P D Sbjct: 441 MSEVKDMNSIDAEAKREVDLLSQEKDNIKADSPDLGITKSIIACECDEASTPSSFEPLKD 500 Query: 263 RLDISSWLPSELCN 304 LD+S WLPSE+CN Sbjct: 501 SLDLSKWLPSEICN 514 >emb|CBI20904.3| unnamed protein product [Vitis vinifera] Length = 2091 Score = 55.5 bits (132), Expect = 5e-06 Identities = 30/74 (40%), Positives = 42/74 (56%) Frame = +2 Query: 83 LSKLQETTSSCVITKRRVDVLNQPNDNRTSNTPGTDIKGSNANYPNSIESTPSSSLPPND 262 +S++++ S KR VD+L+Q DN +++P I S STPSS P D Sbjct: 423 MSEVKDMNSIDAEAKREVDLLSQEKDNIKADSPDLGITKSIIACECDEASTPSSFEPLKD 482 Query: 263 RLDISSWLPSELCN 304 LD+S WLPSE+CN Sbjct: 483 SLDLSKWLPSEICN 496