BLASTX nr result

ID: Atractylodes22_contig00049068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049068
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus comm...    61   8e-08
ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...    55   5e-06
emb|CBI20904.3| unnamed protein product [Vitis vinifera]               55   5e-06

>ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus communis]
           gi|223544402|gb|EEF45923.1| DNA polymerase theta,
           putative [Ricinus communis]
          Length = 2154

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 4/104 (3%)
 Frame = +2

Query: 5   EQVEC-SITDKNPTTVHMSTPCNQVQSLSKL---QETTSSCVITKRRVDVLNQPNDNRTS 172
           EQ EC S+  K   T  ++T CN+VQ+  ++   Q+T S   +TKR  D+L Q  D+   
Sbjct: 395 EQSECGSVNIKCIRTGKIAT-CNEVQTKEEMHDVQKTESIYAMTKREADLLLQYTDSIMP 453

Query: 173 NTPGTDIKGSNANYPNSIESTPSSSLPPNDRLDISSWLPSELCN 304
           N+P  +I+   A+     + TPSS +P  DRLD+ +WLP+E+C+
Sbjct: 454 NSPINEIRNPVASAYGEAD-TPSSFVPLKDRLDLVNWLPAEVCS 496


>ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
           vinifera]
          Length = 2181

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/74 (40%), Positives = 42/74 (56%)
 Frame = +2

Query: 83  LSKLQETTSSCVITKRRVDVLNQPNDNRTSNTPGTDIKGSNANYPNSIESTPSSSLPPND 262
           +S++++  S     KR VD+L+Q  DN  +++P   I  S         STPSS  P  D
Sbjct: 441 MSEVKDMNSIDAEAKREVDLLSQEKDNIKADSPDLGITKSIIACECDEASTPSSFEPLKD 500

Query: 263 RLDISSWLPSELCN 304
            LD+S WLPSE+CN
Sbjct: 501 SLDLSKWLPSEICN 514


>emb|CBI20904.3| unnamed protein product [Vitis vinifera]
          Length = 2091

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/74 (40%), Positives = 42/74 (56%)
 Frame = +2

Query: 83  LSKLQETTSSCVITKRRVDVLNQPNDNRTSNTPGTDIKGSNANYPNSIESTPSSSLPPND 262
           +S++++  S     KR VD+L+Q  DN  +++P   I  S         STPSS  P  D
Sbjct: 423 MSEVKDMNSIDAEAKREVDLLSQEKDNIKADSPDLGITKSIIACECDEASTPSSFEPLKD 482

Query: 263 RLDISSWLPSELCN 304
            LD+S WLPSE+CN
Sbjct: 483 SLDLSKWLPSEICN 496


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