BLASTX nr result

ID: Atractylodes22_contig00048996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048996
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|2...   159   3e-37
ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containi...   158   4e-37
emb|CBI33742.3| unnamed protein product [Vitis vinifera]              153   2e-35
ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi...   153   2e-35
emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]   149   2e-34

>ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|222831850|gb|EEE70327.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  159 bits (401), Expect = 3e-37
 Identities = 74/116 (63%), Positives = 94/116 (81%)
 Frame = +3

Query: 3   LEDARMIFDKLKNKDVVAYNSMIAGYAMHGCCQEALLLFSEMHSKHTRPTDISLIGILSA 182
           LEDAR++F+++ NKDVVA+NSM+ GYAMHG  Q+AL LF EM     +PTDI+ IG+L+A
Sbjct: 123 LEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNA 182

Query: 183 CAHSGLVSVGKGIFVSMKSKHRMEPTIEHYGCMVNLLGRAGYLEEAYGFVKNMKVD 350
           C+H+GLVS G   F SMK ++ +EP +EHYGCMVNLLGRAGYLEEAY  VKNM++D
Sbjct: 183 CSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEID 238



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/106 (31%), Positives = 63/106 (59%)
 Frame = +3

Query: 3   LEDARMIFDKLKNKDVVAYNSMIAGYAMHGCCQEALLLFSEMHSKHTRPTDISLIGILSA 182
           +++AR++FD L+ +D + +N MI GYA HG   E LLLF +M +   RP +++++ +LSA
Sbjct: 22  IDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPNEVTVLAVLSA 81

Query: 183 CAHSGLVSVGKGIFVSMKSKHRMEPTIEHYGCMVNLLGRAGYLEEA 320
           C  +G +  G+ +  S    + +   +     ++++  + G LE+A
Sbjct: 82  CGQTGALETGRWVH-SYIENNGIGINVRVGTSLIDMYSKCGSLEDA 126


>ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
           gi|449513125|ref|XP_004164238.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/115 (65%), Positives = 90/115 (78%)
 Frame = +3

Query: 3   LEDARMIFDKLKNKDVVAYNSMIAGYAMHGCCQEALLLFSEMHSKHTRPTDISLIGILSA 182
           LEDAR++FD++++KDVVA+NSMI GYAMHG  Q AL LF EM     +PTDI+ IGILSA
Sbjct: 324 LEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSA 383

Query: 183 CAHSGLVSVGKGIFVSMKSKHRMEPTIEHYGCMVNLLGRAGYLEEAYGFVKNMKV 347
           C H GLV  G+  F  M+ K+ +EP IEHYGCMVNLLGRAG+LEEAYG VKNM +
Sbjct: 384 CGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTI 438



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/106 (31%), Positives = 60/106 (56%)
 Frame = +3

Query: 3   LEDARMIFDKLKNKDVVAYNSMIAGYAMHGCCQEALLLFSEMHSKHTRPTDISLIGILSA 182
           L+ AR +F+ +K +DVV +N MI GYA  G   E+L LF  M      P +++++ +LSA
Sbjct: 223 LDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSA 282

Query: 183 CAHSGLVSVGKGIFVSMKSKHRMEPTIEHYGCMVNLLGRAGYLEEA 320
           C   G +  G+ I   +++K  ++  +     ++++  + G LE+A
Sbjct: 283 CGQLGALESGRWIHSYIENK-GIQINVHVGTALIDMYSKCGSLEDA 327


>emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  153 bits (386), Expect = 2e-35
 Identities = 74/117 (63%), Positives = 90/117 (76%)
 Frame = +3

Query: 3   LEDARMIFDKLKNKDVVAYNSMIAGYAMHGCCQEALLLFSEMHSKHTRPTDISLIGILSA 182
           LEDAR++FDK+ +KDVVA+NSMI GYAMHG  QEAL LF  M      PT+I+ IGILSA
Sbjct: 241 LEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSA 300

Query: 183 CAHSGLVSVGKGIFVSMKSKHRMEPTIEHYGCMVNLLGRAGYLEEAYGFVKNMKVDP 353
           C HSG V+ G  IF  MK ++ +EP IEHYGCMVNLLGRAG++E+AY  VKNM ++P
Sbjct: 301 CGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEP 357



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/106 (30%), Positives = 60/106 (56%)
 Frame = +3

Query: 3   LEDARMIFDKLKNKDVVAYNSMIAGYAMHGCCQEALLLFSEMHSKHTRPTDISLIGILSA 182
           L+ AR++FD ++ +D V +N MI GY  +G   EAL+LF  M     +P +++++ +LSA
Sbjct: 140 LDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSA 199

Query: 183 CAHSGLVSVGKGIFVSMKSKHRMEPTIEHYGCMVNLLGRAGYLEEA 320
           C   G +  G+ +  S    + ++  +     +V++  + G LE+A
Sbjct: 200 CGQLGALESGRWVH-SYIENNGIQFNVHVGTALVDMYSKCGSLEDA 244


>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  153 bits (386), Expect = 2e-35
 Identities = 74/117 (63%), Positives = 90/117 (76%)
 Frame = +3

Query: 3   LEDARMIFDKLKNKDVVAYNSMIAGYAMHGCCQEALLLFSEMHSKHTRPTDISLIGILSA 182
           LEDAR++FDK+ +KDVVA+NSMI GYAMHG  QEAL LF  M      PT+I+ IGILSA
Sbjct: 307 LEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSA 366

Query: 183 CAHSGLVSVGKGIFVSMKSKHRMEPTIEHYGCMVNLLGRAGYLEEAYGFVKNMKVDP 353
           C HSG V+ G  IF  MK ++ +EP IEHYGCMVNLLGRAG++E+AY  VKNM ++P
Sbjct: 367 CGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEP 423



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/106 (30%), Positives = 60/106 (56%)
 Frame = +3

Query: 3   LEDARMIFDKLKNKDVVAYNSMIAGYAMHGCCQEALLLFSEMHSKHTRPTDISLIGILSA 182
           L+ AR++FD ++ +D V +N MI GY  +G   EAL+LF  M     +P +++++ +LSA
Sbjct: 206 LDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSA 265

Query: 183 CAHSGLVSVGKGIFVSMKSKHRMEPTIEHYGCMVNLLGRAGYLEEA 320
           C   G +  G+ +  S    + ++  +     +V++  + G LE+A
Sbjct: 266 CGQLGALESGRWVH-SYIENNGIQFNVHVGTALVDMYSKCGSLEDA 310


>emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  149 bits (377), Expect = 2e-34
 Identities = 73/117 (62%), Positives = 89/117 (76%)
 Frame = +3

Query: 3   LEDARMIFDKLKNKDVVAYNSMIAGYAMHGCCQEALLLFSEMHSKHTRPTDISLIGILSA 182
           LEDAR++FDK+ +KDVVA+NSMI GYAM G  QEAL LF  M      PT+I+ IGILSA
Sbjct: 254 LEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSA 313

Query: 183 CAHSGLVSVGKGIFVSMKSKHRMEPTIEHYGCMVNLLGRAGYLEEAYGFVKNMKVDP 353
           C HSG V+ G  IF  MK ++ +EP IEHYGCMVNLLGRAG++E+AY  VKNM ++P
Sbjct: 314 CGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEP 370



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/106 (30%), Positives = 60/106 (56%)
 Frame = +3

Query: 3   LEDARMIFDKLKNKDVVAYNSMIAGYAMHGCCQEALLLFSEMHSKHTRPTDISLIGILSA 182
           L+ AR++FD ++ +D V +N MI GY  +G   EAL+LF  M     +P +++++ +LSA
Sbjct: 153 LDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSA 212

Query: 183 CAHSGLVSVGKGIFVSMKSKHRMEPTIEHYGCMVNLLGRAGYLEEA 320
           C   G +  G+ +  S    + ++  +     +V++  + G LE+A
Sbjct: 213 CGQLGALESGRWVH-SYIENNGIQFNVHVGTALVDMYSKCGSLEDA 257


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