BLASTX nr result

ID: Atractylodes22_contig00048918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048918
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002875844.1| chloroplast NAD-MDH [Arabidopsis lyrata subs...    57   3e-14
gb|ACI25097.1| chloroplast malate dehydrogenase [Brassica rapa s...    57   6e-14
ref|NP_190336.1| malate dehydrogenase [Arabidopsis thaliana] gi|...    56   7e-14
emb|CAA74320.1| chloroplast NAD-MDH [Arabidopsis thaliana] gi|19...    56   7e-14
emb|CAB45387.1| NAD-malate dehydrogenase [Nicotiana tabacum]           55   5e-12

>ref|XP_002875844.1| chloroplast NAD-MDH [Arabidopsis lyrata subsp. lyrata]
           gi|297321682|gb|EFH52103.1| chloroplast NAD-MDH
           [Arabidopsis lyrata subsp. lyrata]
          Length = 405

 Score = 57.4 bits (137), Expect(2) = 3e-14
 Identities = 27/43 (62%), Positives = 32/43 (74%)
 Frame = -2

Query: 183 SMVVLPNGVSRKPGMICDDLINITVDIAKTLVKDVADNCHNGF 55
           ++VV+P GV RKPGM  DDL NI  +I KTLV+ VADNC N F
Sbjct: 154 NVVVIPAGVPRKPGMTRDDLFNINANIVKTLVEAVADNCPNAF 196



 Score = 45.8 bits (107), Expect(2) = 3e-14
 Identities = 27/45 (60%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
 Frame = -3

Query: 311 LVSNLYLCDIIKVKEGAVVLNHGHTSSRVRDFT--DELAKCLKDV 183
           LVS L+L DI  VK  A  L+H +T S+VRDFT   ELA CLKDV
Sbjct: 109 LVSTLHLYDIANVKGVAADLSHCNTPSQVRDFTGPSELADCLKDV 153


>gb|ACI25097.1| chloroplast malate dehydrogenase [Brassica rapa subsp. pekinensis]
          Length = 402

 Score = 56.6 bits (135), Expect(2) = 6e-14
 Identities = 27/43 (62%), Positives = 31/43 (72%)
 Frame = -2

Query: 183 SMVVLPNGVSRKPGMICDDLINITVDIAKTLVKDVADNCHNGF 55
           ++VV+P GV RKPGM  DDL NI   I KTLV+ VADNC N F
Sbjct: 155 NVVVIPAGVPRKPGMTRDDLFNINAGIVKTLVEAVADNCPNAF 197



 Score = 45.4 bits (106), Expect(2) = 6e-14
 Identities = 27/45 (60%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
 Frame = -3

Query: 311 LVSNLYLCDIIKVKEGAVVLNHGHTSSRVRDFTD--ELAKCLKDV 183
           LVS L+L DI  VK  A  L+H +T S+VRDFT   ELA CLKDV
Sbjct: 110 LVSTLHLYDIANVKGVAADLSHCNTPSQVRDFTGPAELADCLKDV 154


>ref|NP_190336.1| malate dehydrogenase [Arabidopsis thaliana]
           gi|75313643|sp|Q9SN86.1|MDHP_ARATH RecName: Full=Malate
           dehydrogenase, chloroplastic; AltName: Full=pNAD-MDH;
           Flags: Precursor gi|6522535|emb|CAB61978.1| chloroplast
           NAD-dependent malate dehydrogenase [Arabidopsis
           thaliana] gi|22135807|gb|AAM91090.1| AT3g47520/F1P2_70
           [Arabidopsis thaliana] gi|23308437|gb|AAN18188.1|
           At3g47520/F1P2_70 [Arabidopsis thaliana]
           gi|332644771|gb|AEE78292.1| malate dehydrogenase
           [Arabidopsis thaliana]
          Length = 403

 Score = 55.8 bits (133), Expect(2) = 7e-14
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = -2

Query: 183 SMVVLPNGVSRKPGMICDDLINITVDIAKTLVKDVADNCHNGF 55
           ++VV+P GV RKPGM  DDL NI  +I KTLV+ VA+NC N F
Sbjct: 152 NVVVIPAGVPRKPGMTRDDLFNINANIVKTLVEAVAENCPNAF 194



 Score = 45.8 bits (107), Expect(2) = 7e-14
 Identities = 27/45 (60%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
 Frame = -3

Query: 311 LVSNLYLCDIIKVKEGAVVLNHGHTSSRVRDFT--DELAKCLKDV 183
           LVS L+L DI  VK  A  L+H +T S+VRDFT   ELA CLKDV
Sbjct: 107 LVSTLHLYDIANVKGVAADLSHCNTPSQVRDFTGPSELADCLKDV 151


>emb|CAA74320.1| chloroplast NAD-MDH [Arabidopsis thaliana]
           gi|195604872|gb|ACG24266.1| malate dehydrogenase [Zea
           mays]
          Length = 403

 Score = 55.8 bits (133), Expect(2) = 7e-14
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = -2

Query: 183 SMVVLPNGVSRKPGMICDDLINITVDIAKTLVKDVADNCHNGF 55
           ++VV+P GV RKPGM  DDL NI  +I KTLV+ VA+NC N F
Sbjct: 152 NVVVIPAGVPRKPGMTRDDLFNINANIVKTLVEAVAENCPNAF 194



 Score = 45.8 bits (107), Expect(2) = 7e-14
 Identities = 27/45 (60%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
 Frame = -3

Query: 311 LVSNLYLCDIIKVKEGAVVLNHGHTSSRVRDFT--DELAKCLKDV 183
           LVS L+L DI  VK  A  L+H +T S+VRDFT   ELA CLKDV
Sbjct: 107 LVSTLHLYDIANVKGVAADLSHCNTPSQVRDFTGPSELADCLKDV 151


>emb|CAB45387.1| NAD-malate dehydrogenase [Nicotiana tabacum]
          Length = 412

 Score = 55.5 bits (132), Expect(2) = 5e-12
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = -2

Query: 183 SMVVLPNGVSRKPGMICDDLINITVDIAKTLVKDVADNCHNGF 55
           ++VV+P GV RKPGM  DDL NI  +I KTLV+ VADNC + F
Sbjct: 163 NVVVIPAGVPRKPGMTRDDLFNINANIVKTLVEAVADNCPDAF 205



 Score = 40.0 bits (92), Expect(2) = 5e-12
 Identities = 25/45 (55%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = -3

Query: 311 LVSNLYLCDIIKVKEGAVVLNHGHTSSRVRDFT--DELAKCLKDV 183
           LVS L L DI  VK  A  L+H +T S+V DFT   ELA CLK V
Sbjct: 118 LVSELNLYDIANVKGVAADLSHCNTPSKVSDFTGASELANCLKGV 162


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