BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048872
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]         67   2e-18
gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidop...    66   4e-17
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...    67   4e-16
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]    58   4e-16
emb|CAA20201.1| putative transposable element [Arabidopsis thali...    62   1e-15

>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score = 66.6 bits (161), Expect(2) = 2e-18
 Identities = 39/79 (49%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
 Frame = -3

Query: 377  LVTKPTSVRLVVSCRCIIKR-VGIPRVESARYKARLFGSGFTEVEGVDFTKVFSFVVKHK 201
            L+  P + RL+ +C+ I KR  GIP VE  +YKARL   GFT+ EGVDF ++FS VVKH 
Sbjct: 848  LIPNPGNKRLI-NCKWIFKRNEGIPDVEPPKYKARLVARGFTQREGVDFNEIFSPVVKHS 906

Query: 200  SIWLLLYV*FELNMVLEHV 144
            SI +LL +   L++ LE +
Sbjct: 907  SIRILLAMVALLDLELEQM 925



 Score = 50.8 bits (120), Expect(2) = 2e-18
 Identities = 25/44 (56%), Positives = 31/44 (70%)
 Frame = -1

Query: 148  MCVKKTFLYGTLDETILMSQPEGFKVKGKED*FCKLNRSFLWLK 17
            M VK  FL+G L+E ILM+QPEGF+ K KED  C L++S   LK
Sbjct: 925  MDVKTAFLHGNLEEQILMAQPEGFECKDKEDYVCLLHKSLYGLK 968


>gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1166

 Score = 65.9 bits (159), Expect(2) = 4e-17
 Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
 Frame = -3

Query: 377  LVTKPTSVRLVVSCRCIIK-RVGIPRVESARYKARLFGSGFTEVEGVDFTKVFSFVVKHK 201
            L+ KP   +L+  C+ I K + GIP VE  RYKARL   GF++ EG+D+ +VFS VVKH 
Sbjct: 767  LIEKPEKQKLI-GCKWIFKLKPGIPGVEKQRYKARLVAKGFSQQEGIDYNEVFSLVVKHV 825

Query: 200  SIWLLLYV*FELNMVLEHV 144
            SI L+L +   ++  LE +
Sbjct: 826  SIRLMLSLMVNMDYELEQM 844



 Score = 47.0 bits (110), Expect(2) = 4e-17
 Identities = 24/44 (54%), Positives = 29/44 (65%)
 Frame = -1

Query: 148 MCVKKTFLYGTLDETILMSQPEGFKVKGKED*FCKLNRSFLWLK 17
           M VK  FL+G L+E ILMSQPEGF  +G E+  C L +S   LK
Sbjct: 844 MDVKTAFLHGNLEERILMSQPEGFIQEGNENKVCLLRKSLYGLK 887


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score = 66.6 bits (161), Expect(2) = 4e-16
 Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
 Frame = -3

Query: 377  LVTKPTSVRLVVSCRCIIKR-VGIPRVESARYKARLFGSGFTEVEGVDFTKVFSFVVKHK 201
            ++ KP   R V+ C+ I KR  GIP VE  RYKARL   GF++ EG+D+ ++FS VVKH 
Sbjct: 857  VIDKPEGKR-VIGCKWIFKRKAGIPGVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHV 915

Query: 200  SIWLLLYV*FELNMVLEHV 144
            SI  LL +  + +M LE +
Sbjct: 916  SIRYLLSIVVQFDMELEQL 934



 Score = 42.7 bits (99), Expect(2) = 4e-16
 Identities = 21/42 (50%), Positives = 27/42 (64%)
 Frame = -1

Query: 142  VKKTFLYGTLDETILMSQPEGFKVKGKED*FCKLNRSFLWLK 17
            VK  FL+G LDE ILMSQPEG++ +   +  C L +S   LK
Sbjct: 936  VKTAFLHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLK 977


>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
          Length = 939

 Score = 57.8 bits (138), Expect(2) = 4e-16
 Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
 Frame = -3

Query: 377 LVTKPTSVRLVVSCRCIIKR-VGIPRVESARYKARLFGSGFTEVEGVDFTKVFSFVVKHK 201
           LV KP   + VV C+ + K+ +GIP VE  R+KA L    +T+ EG+DF ++FS +VKH 
Sbjct: 492 LVDKPKGCK-VVGCKWVFKKKLGIPHVEPERFKATLVAKAYTQREGMDFNEIFSPMVKHT 550

Query: 200 SIWLLL 183
           SI +LL
Sbjct: 551 SIRVLL 556



 Score = 51.6 bits (122), Expect(2) = 4e-16
 Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
 Frame = -1

Query: 172 LSLIWYWN-----MCVKKTFLYGTLDETILMSQPEGFKVKGKED*FCKLNRSFLWLK 17
           L+L+  WN     M V + FL+G L+E I M QP+GF VKGKE+  C L RS   LK
Sbjct: 556 LALVSLWNLELXQMDVNRAFLHGELEEEIFMQQPKGFIVKGKENQVCLLKRSLYGLK 612


>emb|CAA20201.1| putative transposable element [Arabidopsis thaliana]
            gi|7268932|emb|CAB79135.1| putative transposable element
            [Arabidopsis thaliana]
          Length = 1308

 Score = 61.6 bits (148), Expect(2) = 1e-15
 Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
 Frame = -3

Query: 347  VVSCRCIIK-RVGIPRVESARYKARLFGSGFTEVEGVDFTKVFSFVVKHKSIWLLLYV*F 171
            V+SCR + K + GIP VE+ RYKARL   GFT+ +G+D+ +VF+ VVKH SI +L+    
Sbjct: 863  VISCRWLFKLKPGIPGVEAQRYKARLVARGFTQQKGIDYEEVFAPVVKHISIRILMSAVV 922

Query: 170  ELNMVLEHV 144
            + +M LE +
Sbjct: 923  KDDMELEQM 931



 Score = 46.2 bits (108), Expect(2) = 1e-15
 Identities = 22/44 (50%), Positives = 29/44 (65%)
 Frame = -1

Query: 148  MCVKKTFLYGTLDETILMSQPEGFKVKGKED*FCKLNRSFLWLK 17
            M VK TFL+G LD+ + M QPEGF+V  ++D  C L +S   LK
Sbjct: 931  MDVKTTFLHGELDQVLYMEQPEGFEVNPEKDQVCLLKKSLYGLK 974