BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048855
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY85235.1| RNA polymerase II second largest subunit [Tetrace...   209   2e-52
gb|AAY85217.1| RNA polymerase II second largest subunit [Muehlen...   207   7e-52
ref|XP_001766425.1| predicted protein [Physcomitrella patens sub...   207   9e-52
gb|AAZ08461.1| RNA polymerase II second largest subunit [Liriode...   207   9e-52
gb|AAY85203.1| RNA polymerase II second largest subunit [Dicentr...   207   9e-52

>gb|AAY85235.1| RNA polymerase II second largest subunit [Tetracentron sinense]
          Length = 951

 Score =  209 bits (532), Expect = 2e-52
 Identities = 103/114 (90%), Positives = 108/114 (94%)
 Frame = +1

Query: 1   KMSTNHVYVFKKRQPNKYSYAAEVRSVSQSQNKTPSGMFVRMLSRAGGKEGSSGQYIRAT 180
           KMSTNHVYVFKKRQPNKY+Y AEVRS+++SQN+ PSGMFVRMLSRA  K GSSGQYIRAT
Sbjct: 100 KMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSGMFVRMLSRASAKGGSSGQYIRAT 159

Query: 181 LPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMEFLRPSLEEAFVIQN 342
           LPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMME LRPSLEEAFVIQN
Sbjct: 160 LPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQN 213


>gb|AAY85217.1| RNA polymerase II second largest subunit [Muehlenbeckia platyclada]
          Length = 875

 Score =  207 bits (527), Expect = 7e-52
 Identities = 102/114 (89%), Positives = 108/114 (94%)
 Frame = +1

Query: 1   KMSTNHVYVFKKRQPNKYSYAAEVRSVSQSQNKTPSGMFVRMLSRAGGKEGSSGQYIRAT 180
           KMSTNHVYVFKKRQPNKY+Y AEVRS++++QN+ PS MFVRMLSRAG K GSSGQYIRAT
Sbjct: 100 KMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSTMFVRMLSRAGAKGGSSGQYIRAT 159

Query: 181 LPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMEFLRPSLEEAFVIQN 342
           LPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMME LRPSLEEAFVIQN
Sbjct: 160 LPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQN 213


>ref|XP_001766425.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162682334|gb|EDQ68753.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 1185

 Score =  207 bits (526), Expect = 9e-52
 Identities = 101/114 (88%), Positives = 107/114 (93%)
 Frame = +1

Query: 1   KMSTNHVYVFKKRQPNKYSYAAEVRSVSQSQNKTPSGMFVRMLSRAGGKEGSSGQYIRAT 180
           KMSTNHVYVFKKRQPNKY Y AEVRS++++QN+ PSGMFVRMLSRAG K GSSGQYIRAT
Sbjct: 199 KMSTNHVYVFKKRQPNKYCYVAEVRSMAENQNRPPSGMFVRMLSRAGAKGGSSGQYIRAT 258

Query: 181 LPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMEFLRPSLEEAFVIQN 342
           LPYIRTEIPII+VFRALGFVADKDILEHICYDFSDT MME LRPSLEEAFVIQN
Sbjct: 259 LPYIRTEIPIIVVFRALGFVADKDILEHICYDFSDTAMMELLRPSLEEAFVIQN 312


>gb|AAZ08461.1| RNA polymerase II second largest subunit [Liriodendron tulipifera]
          Length = 942

 Score =  207 bits (526), Expect = 9e-52
 Identities = 102/114 (89%), Positives = 107/114 (93%)
 Frame = +1

Query: 1   KMSTNHVYVFKKRQPNKYSYAAEVRSVSQSQNKTPSGMFVRMLSRAGGKEGSSGQYIRAT 180
           KMSTNHVYVFKKRQPNKY+Y AEVRS+++SQN+ PS MFVRMLSRA  K GSSGQYIRAT
Sbjct: 92  KMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRASAKGGSSGQYIRAT 151

Query: 181 LPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMEFLRPSLEEAFVIQN 342
           LPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMME LRPSLEEAFVIQN
Sbjct: 152 LPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQN 205


>gb|AAY85203.1| RNA polymerase II second largest subunit [Dicentra formosa]
          Length = 873

 Score =  207 bits (526), Expect = 9e-52
 Identities = 102/114 (89%), Positives = 107/114 (93%)
 Frame = +1

Query: 1   KMSTNHVYVFKKRQPNKYSYAAEVRSVSQSQNKTPSGMFVRMLSRAGGKEGSSGQYIRAT 180
           KMSTNHVYVFKKRQPNKY+Y AEVRS+++SQN+ PS MFVRMLSRA  K GSSGQYIRAT
Sbjct: 100 KMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRASAKGGSSGQYIRAT 159

Query: 181 LPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMEFLRPSLEEAFVIQN 342
           LPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMME LRPSLEEAFVIQN
Sbjct: 160 LPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQN 213