BLASTX nr result

ID: Atractylodes22_contig00048748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048748
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532644.1| conserved hypothetical protein [Ricinus comm...   185   3e-45
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   119   3e-25
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   114   6e-24
ref|XP_004169412.1| PREDICTED: uncharacterized protein LOC101228...   105   3e-21
ref|XP_004164098.1| PREDICTED: uncharacterized protein LOC101232...   105   5e-21

>ref|XP_002532644.1| conserved hypothetical protein [Ricinus communis]
           gi|223527635|gb|EEF29747.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 462

 Score =  185 bits (470), Expect = 3e-45
 Identities = 89/115 (77%), Positives = 102/115 (88%)
 Frame = +3

Query: 3   AVCLEGDALAWFQWEERRRPFRSWTEFKELVITRFRSAQEGSLQEQLLALKQTSMVKEFR 182
           +VCLEGDALAWFQWEE RRPFRSW +FKE +I  FRS QEG+L +QLLALKQT+ VKEFR
Sbjct: 144 SVCLEGDALAWFQWEEGRRPFRSWVDFKESLIVCFRSTQEGTLHDQLLALKQTTTVKEFR 203

Query: 183 RQFEVISAPLRELPETVLEAAFVNGVRPDIQAELRQWSPVGLKQKMQVAQKIEDK 347
           RQFE+I+APL+ L E VLEAAFVNG+RPD+QAELRQWSP GL +KMQVAQKIE+K
Sbjct: 204 RQFEIIAAPLKGLAEDVLEAAFVNGLRPDMQAELRQWSPFGLDKKMQVAQKIEEK 258


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  119 bits (297), Expect = 3e-25
 Identities = 53/114 (46%), Positives = 79/114 (69%)
 Frame = +3

Query: 6   VCLEGDALAWFQWEERRRPFRSWTEFKELVITRFRSAQEGSLQEQLLALKQTSMVKEFRR 185
           V +EGDAL W+QWE +RRPFR+W   K  V+T+FR    GSL EQ L+  QT+ V E+RR
Sbjct: 214 VAMEGDALRWYQWENKRRPFRNWESMKSFVLTQFRPLNVGSLHEQWLSTTQTASVWEYRR 273

Query: 186 QFEVISAPLRELPETVLEAAFVNGVRPDIQAELRQWSPVGLKQKMQVAQKIEDK 347
           +F   +APL  +PE +L   F++G+ P++Q+E+R  +P  L Q M++A K+E++
Sbjct: 274 KFVETAAPLDGIPEEILMGKFIHGLNPELQSEIRVLNPYNLDQAMELALKLEER 327


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/115 (45%), Positives = 78/115 (67%)
 Frame = +3

Query: 3    AVCLEGDALAWFQWEERRRPFRSWTEFKELVITRFRSAQEGSLQEQLLALKQTSMVKEFR 182
            A+ L+GDAL+W+QW + R  F SW   K  ++ RFR  QEGSL EQ LA++Q   V  + 
Sbjct: 809  AMSLDGDALSWYQWTDSREVFGSWENLKRRLLLRFRLTQEGSLCEQFLAVRQQGTVAAYW 868

Query: 183  RQFEVISAPLRELPETVLEAAFVNGVRPDIQAELRQWSPVGLKQKMQVAQKIEDK 347
            R+FE++  PL+ + E V+E+ F+NG+ P+I+AE R   P GL   M++AQ++ED+
Sbjct: 869  REFEILETPLKGISEEVMESTFMNGLLPEIRAEQRLLQPYGLGHLMEMAQRVEDR 923


>ref|XP_004169412.1| PREDICTED: uncharacterized protein LOC101228221 [Cucumis sativus]
          Length = 703

 Score =  105 bits (263), Expect = 3e-21
 Identities = 48/111 (43%), Positives = 79/111 (71%)
 Frame = +3

Query: 12  LEGDALAWFQWEERRRPFRSWTEFKELVITRFRSAQEGSLQEQLLALKQTSMVKEFRRQF 191
           LEG+AL W++W++ R    SW EF++L+  RF+ + +G    +L+ L+Q + V+E+RR+ 
Sbjct: 69  LEGEALDWYKWKDDRTKINSWEEFRQLLWARFKPSGQGDKHARLMKLQQETTVREYRRRV 128

Query: 192 EVISAPLRELPETVLEAAFVNGVRPDIQAELRQWSPVGLKQKMQVAQKIED 344
           E  SA L+++ +  LE+ FV G+R +IQ+E+R+ +PVGL+ KM +AQ IED
Sbjct: 129 EQFSASLKDMSDAALESKFVCGLREEIQSEIRKLNPVGLEAKMLMAQVIED 179


>ref|XP_004164098.1| PREDICTED: uncharacterized protein LOC101232566 [Cucumis sativus]
          Length = 707

 Score =  105 bits (261), Expect = 5e-21
 Identities = 50/114 (43%), Positives = 76/114 (66%)
 Frame = +3

Query: 6   VCLEGDALAWFQWEERRRPFRSWTEFKELVITRFRSAQEGSLQEQLLALKQTSMVKEFRR 185
           +  EG AL W++ +E R  F  W   KE V+ RFRS +EGSL E+ L ++QT+ V+E+R 
Sbjct: 144 ISFEGPALNWYRSQEERDKFVDWANLKERVLVRFRSTREGSLYERFLRIQQTTTVEEYRN 203

Query: 186 QFEVISAPLRELPETVLEAAFVNGVRPDIQAELRQWSPVGLKQKMQVAQKIEDK 347
            F+ + APL +L + V+E  F+ G++P IQAE+    P GL Q M++AQK+E++
Sbjct: 204 LFDKLVAPLSDLADKVVEETFMLGLKPWIQAEMDFCEPQGLSQMMRIAQKVENR 257


Top