BLASTX nr result
ID: Atractylodes22_contig00048740
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00048740 (229 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002530366.1| Transmembrane and coiled-coil domains protei... 71 8e-11 ref|XP_002280441.1| PREDICTED: transmembrane and coiled-coil dom... 71 8e-11 gb|AFW90618.1| transmembrane and coiled-coil domains protein [So... 70 2e-10 gb|AAY43795.1| Fb27 [Gossypium hirsutum] 70 2e-10 gb|AAQ84318.1| fiber protein Fb27 [Gossypium barbadense] 68 9e-10 >ref|XP_002530366.1| Transmembrane and coiled-coil domains protein, putative [Ricinus communis] gi|223530113|gb|EEF32027.1| Transmembrane and coiled-coil domains protein, putative [Ricinus communis] Length = 192 Score = 71.2 bits (173), Expect = 8e-11 Identities = 35/40 (87%), Positives = 37/40 (92%) Frame = +3 Query: 3 LYFLCSISMRTNLQKFLGFSPPRGAAGAGLFPVHDASKTN 122 LYFLCSIS+RTNLQKFLGFSPPRGAAGAGLFP+ D KTN Sbjct: 154 LYFLCSISIRTNLQKFLGFSPPRGAAGAGLFPMPD-PKTN 192 >ref|XP_002280441.1| PREDICTED: transmembrane and coiled-coil domains protein 1 [Vitis vinifera] gi|297739810|emb|CBI29992.3| unnamed protein product [Vitis vinifera] Length = 193 Score = 71.2 bits (173), Expect = 8e-11 Identities = 35/40 (87%), Positives = 37/40 (92%) Frame = +3 Query: 3 LYFLCSISMRTNLQKFLGFSPPRGAAGAGLFPVHDASKTN 122 LYFLCSIS+RTNLQKFLGFSPPRGAAGAGLFP+ D KTN Sbjct: 155 LYFLCSISIRTNLQKFLGFSPPRGAAGAGLFPMPD-PKTN 193 >gb|AFW90618.1| transmembrane and coiled-coil domains protein [Solanum tuberosum] Length = 194 Score = 70.1 bits (170), Expect = 2e-10 Identities = 34/40 (85%), Positives = 37/40 (92%) Frame = +3 Query: 3 LYFLCSISMRTNLQKFLGFSPPRGAAGAGLFPVHDASKTN 122 LYFLCSIS+RTNLQKFLGFSPPRG+AGAGLFP+ D KTN Sbjct: 156 LYFLCSISIRTNLQKFLGFSPPRGSAGAGLFPMPD-PKTN 194 >gb|AAY43795.1| Fb27 [Gossypium hirsutum] Length = 194 Score = 70.1 bits (170), Expect = 2e-10 Identities = 32/35 (91%), Positives = 34/35 (97%) Frame = +3 Query: 3 LYFLCSISMRTNLQKFLGFSPPRGAAGAGLFPVHD 107 LYFLCSIS+RTNLQKFLGFSPPRGAAGAGLFP+ D Sbjct: 156 LYFLCSISIRTNLQKFLGFSPPRGAAGAGLFPMPD 190 >gb|AAQ84318.1| fiber protein Fb27 [Gossypium barbadense] Length = 194 Score = 67.8 bits (164), Expect = 9e-10 Identities = 34/40 (85%), Positives = 36/40 (90%) Frame = +3 Query: 3 LYFLCSISMRTNLQKFLGFSPPRGAAGAGLFPVHDASKTN 122 LYFL SIS+RTNLQKFLGFSPPRGAAGAGLFP+ D KTN Sbjct: 156 LYFLFSISIRTNLQKFLGFSPPRGAAGAGLFPIPD-PKTN 194