BLASTX nr result

ID: Atractylodes22_contig00048732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048732
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF82236.1|AC069143_12 Contains similarity to a transposable ...   120   9e-26
ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerizat...   120   9e-26
ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc...   120   9e-26
ref|NP_192704.1| uncharacterized protein [Arabidopsis thaliana] ...   117   7e-25
ref|XP_003589867.1| hypothetical protein MTR_1g040620 [Medicago ...   107   8e-22

>gb|AAF82236.1|AC069143_12 Contains similarity to a transposable element Tip100 protein for
           transposase from Ipomoea purpurea gb|4063769 and is a
           member of the transmembrane 4 family PF|00335
           [Arabidopsis thaliana]
          Length = 811

 Score =  120 bits (302), Expect = 9e-26
 Identities = 64/133 (48%), Positives = 81/133 (60%), Gaps = 1/133 (0%)
 Frame = +1

Query: 76  MERFFKRKLSSMVLDPQVEMSISQPDSVIDLNDHP*DPSEMPRIICYHHNQWDAKWRQYL 255
           M RF KRK              S P   I+LN+ P DP++   I+ YH NQ D   R+YL
Sbjct: 43  MYRFLKRK--------------SPPPPDINLNELPSDPAKRKSILSYHPNQRDEVRREYL 88

Query: 256 LRGHCKPRGHEFPTRTIGTKLRNFFSIWFDEF-CWLEYSVKADKAYCLCCYLFRDNVGNQ 432
           +RG C+PRGH+F    IG  LR F   WFD +  WLEYSV+ +KA+CL CYLFRD  GNQ
Sbjct: 89  IRGPCQPRGHKFKQIAIGKVLRRFNPKWFDLYGDWLEYSVEKEKAFCLYCYLFRDQTGNQ 148

Query: 433 AGNDAFVTEGFNS 471
            G+D+F++ GF S
Sbjct: 149 GGSDSFLSTGFCS 161


>ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerization domain
           [Arabidopsis thaliana] gi|332191703|gb|AEE29824.1|
           TTF-type zinc finger protein with HAT dimerization
           domain [Arabidopsis thaliana]
          Length = 769

 Score =  120 bits (302), Expect = 9e-26
 Identities = 64/133 (48%), Positives = 81/133 (60%), Gaps = 1/133 (0%)
 Frame = +1

Query: 76  MERFFKRKLSSMVLDPQVEMSISQPDSVIDLNDHP*DPSEMPRIICYHHNQWDAKWRQYL 255
           M RF KRK              S P   I+LN+ P DP++   I+ YH NQ D   R+YL
Sbjct: 1   MYRFLKRK--------------SPPPPDINLNELPSDPAKRKSILSYHPNQRDEVRREYL 46

Query: 256 LRGHCKPRGHEFPTRTIGTKLRNFFSIWFDEF-CWLEYSVKADKAYCLCCYLFRDNVGNQ 432
           +RG C+PRGH+F    IG  LR F   WFD +  WLEYSV+ +KA+CL CYLFRD  GNQ
Sbjct: 47  IRGPCQPRGHKFKQIAIGKVLRRFNPKWFDLYGDWLEYSVEKEKAFCLYCYLFRDQTGNQ 106

Query: 433 AGNDAFVTEGFNS 471
            G+D+F++ GF S
Sbjct: 107 GGSDSFLSTGFCS 119


>ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 892

 Score =  120 bits (302), Expect = 9e-26
 Identities = 61/133 (45%), Positives = 76/133 (57%), Gaps = 1/133 (0%)
 Frame = +1

Query: 76  MERFFKRKLSSMVLDPQVEMSISQPDSVIDLNDHP*DPSEMPRIICYHHNQWDAKWRQYL 255
           ME F KR  SS       E   S      +L + P DP + P++  YH N  +   R YL
Sbjct: 114 MENFLKRSRSSH------EQGSSSQHVSCNLEELPSDPGKRPKMSTYHPNDQEIIRRAYL 167

Query: 256 LRGHCKPRGHEFPTRTIGTKLRNFFSIWFDEFC-WLEYSVKADKAYCLCCYLFRDNVGNQ 432
            +G C+P  H FP R IG  +R F   WF+EF  WLEYS++ D A+CLCCYLFR + G Q
Sbjct: 168 QKGPCQPNQHNFPQRKIGNSMRRFCPSWFNEFGNWLEYSIEKDAAFCLCCYLFRPDFGKQ 227

Query: 433 AGNDAFVTEGFNS 471
           AG D F+TEGF S
Sbjct: 228 AGGDTFITEGFTS 240


>ref|NP_192704.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4538896|emb|CAB39633.1| putative protein [Arabidopsis
           thaliana] gi|7267661|emb|CAB78089.1| putative protein
           [Arabidopsis thaliana] gi|332657378|gb|AEE82778.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 664

 Score =  117 bits (294), Expect = 7e-25
 Identities = 63/133 (47%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
 Frame = +1

Query: 76  MERFFKRKLSSMVLDPQVEMSISQPDSVIDLNDHP*DPSEMPRIICYHHNQWDAKWRQYL 255
           M RF KRK              S P   I+ N  P DP++   I+ YH NQ D   R+YL
Sbjct: 1   MYRFMKRK--------------SPPPPDINFNKLPSDPAKRKSILSYHLNQRDEVRREYL 46

Query: 256 LRGHCKPRGHEFPTRTIGTKLRNFFSIWFDEF-CWLEYSVKADKAYCLCCYLFRDNVGNQ 432
           +RG C+PRGH+F    IG  LR F   WFD +  WLEYSV+ +KA+CL CYLFRD  GNQ
Sbjct: 47  IRGPCQPRGHKFKQIVIGKVLRRFNPKWFDLYGDWLEYSVEKEKAFCLYCYLFRDQAGNQ 106

Query: 433 AGNDAFVTEGFNS 471
            G+D+F++ GF S
Sbjct: 107 GGSDSFLSTGFCS 119


>ref|XP_003589867.1| hypothetical protein MTR_1g040620 [Medicago truncatula]
           gi|355478915|gb|AES60118.1| hypothetical protein
           MTR_1g040620 [Medicago truncatula]
          Length = 665

 Score =  107 bits (268), Expect = 8e-22
 Identities = 59/143 (41%), Positives = 75/143 (52%), Gaps = 11/143 (7%)
 Frame = +1

Query: 76  MERFFKRKLSSMVLDP----------QVEMSISQPDSVIDLNDHP*DPSEMPRIICYHHN 225
           MER++KR   S  ++           Q   S       +DL + P +P E  ++ CYH N
Sbjct: 1   MERYYKRTSESQEVNEVETTPTPTHEQPGPSFKNGFLEVDLENLPANPGERKQLSCYHPN 60

Query: 226 QWDAKWRQYLLRGHCKPRGHEFPTRTIGTKLRNFFSIWFDEF-CWLEYSVKADKAYCLCC 402
             D   R YL +G C+P+ H FP R  GT LR F   WF EF  WLEYSV  D  +CLCC
Sbjct: 61  DRDEIRRAYLAKGPCQPKEHNFPQRPFGTFLRKFNPDWFLEFGSWLEYSVSKDVVFCLCC 120

Query: 403 YLFRDNVGNQAGNDAFVTEGFNS 471
           YL R  +G   G DAF TE F++
Sbjct: 121 YLMRFEIGENKGWDAFFTERFSN 143


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