BLASTX nr result

ID: Atractylodes22_contig00048725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048725
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312133.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
ref|XP_002315186.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002276362.1| PREDICTED: uncharacterized protein LOC100263...    99   4e-19
ref|XP_004166822.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    98   8e-19
emb|CAN65630.1| hypothetical protein VITISV_019369 [Vitis vinifera]    98   8e-19

>ref|XP_002312133.1| predicted protein [Populus trichocarpa] gi|222851953|gb|EEE89500.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  107 bits (268), Expect = 8e-22
 Identities = 66/140 (47%), Positives = 76/140 (54%), Gaps = 42/140 (30%)
 Frame = +1

Query: 7   MRTLCPNLDNEDALETVLEVPIPEESFDDTKINHNITSWQTMKSWIKPYSTDQRRQFSDY 186
           MR LCPN D ED LETVLEVPIPEE F   K  H+  SWQ MK+W++P+S  +R   + +
Sbjct: 1   MRKLCPNFDREDGLETVLEVPIPEEMFASNK--HSNRSWQNMKAWMRPHS--ERSMTTLF 56

Query: 187 GGRNAEIQLLLGVV------------------------------------------GERA 240
           GG+N EIQLLLGVV                                          GERA
Sbjct: 57  GGKNTEIQLLLGVVGAPLIPLQIRCDHQLINCNIKDQPIEASMAKYIVQQYIAAVGGERA 116

Query: 241 LNLVDSMYAVGKVKMVASEF 300
           LN VDSMYA+GKVKM ASEF
Sbjct: 117 LNSVDSMYAMGKVKMEASEF 136


>ref|XP_002315186.1| predicted protein [Populus trichocarpa] gi|222864226|gb|EEF01357.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  106 bits (265), Expect = 2e-21
 Identities = 64/140 (45%), Positives = 75/140 (53%), Gaps = 42/140 (30%)
 Frame = +1

Query: 7   MRTLCPNLDNEDALETVLEVPIPEESFDDTKINHNITSWQTMKSWIKPYSTDQRRQFSDY 186
           MR LCPN D ED L+TVLEVPIPEE F   K  H   SWQ MK+W++P+  ++R   + +
Sbjct: 1   MRKLCPNFDREDGLDTVLEVPIPEEMFASNK--HGNRSWQNMKAWMRPH--NERSMTTRF 56

Query: 187 GGRNAEIQLLLGVV------------------------------------------GERA 240
           GG+N EIQ LLGVV                                          GERA
Sbjct: 57  GGKNTEIQFLLGVVGAPLIPLPILCDHQFINRNIKDHPIESSMAKYIVQQYIAAVGGERA 116

Query: 241 LNLVDSMYAVGKVKMVASEF 300
           LN VDSMYA+GKVKMVASEF
Sbjct: 117 LNSVDSMYAMGKVKMVASEF 136


>ref|XP_002276362.1| PREDICTED: uncharacterized protein LOC100263234 [Vitis vinifera]
           gi|296086114|emb|CBI31555.3| unnamed protein product
           [Vitis vinifera]
          Length = 426

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 63/140 (45%), Positives = 71/140 (50%), Gaps = 42/140 (30%)
 Frame = +1

Query: 7   MRTLCPNLDNEDALETVLEVPIPEESFDDTKINHNITSWQTMKSWIKPYSTDQRRQFSDY 186
           MR LCPN D ED L+TVLEVPIPEE F   K      SWQ +KSW+K  S  +R   S +
Sbjct: 1   MRKLCPNFDREDGLDTVLEVPIPEEMFPSHK--STSLSWQNVKSWMK--SNPERSATSIF 56

Query: 187 GGRNAEIQLLLGVV------------------------------------------GERA 240
           GGRN EIQLLLGVV                                          GE A
Sbjct: 57  GGRNTEIQLLLGVVGAPLIPLPVRCDRHPINQSIKDHPIEASMAKYIVQQYIAAAGGETA 116

Query: 241 LNLVDSMYAVGKVKMVASEF 300
           LN +DSMYA+GKV+MV SEF
Sbjct: 117 LNSIDSMYAMGKVRMVTSEF 136


>ref|XP_004166822.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101207651
           [Cucumis sativus]
          Length = 448

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 62/144 (43%), Positives = 71/144 (49%), Gaps = 46/144 (31%)
 Frame = +1

Query: 7   MRTLCPNLDNEDALETVLEVPIPEESFDDTKINHNITSWQTMKSWIK--PYSTDQRRQFS 180
           MR LCPN D E  L+TVLEVPIPEE F       +  SWQ MKSW+K    S+      S
Sbjct: 1   MRKLCPNFDREYGLDTVLEVPIPEEMFSSNTTKTHAISWQAMKSWVKSNDKSSHATSITS 60

Query: 181 DYGGRNAEIQLLLGVV-------------------------------------------- 228
            +GGRNAEIQLLLGVV                                            
Sbjct: 61  LFGGRNAEIQLLLGVVGAPLIPLPITFDQQQPINRNNIKDNPIEASMAKYIVQQYVAAVG 120

Query: 229 GERALNLVDSMYAVGKVKMVASEF 300
           GE+ALN ++SMYA+GKVKM ASEF
Sbjct: 121 GEQALNCIESMYAMGKVKMAASEF 144


>emb|CAN65630.1| hypothetical protein VITISV_019369 [Vitis vinifera]
          Length = 426

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 63/140 (45%), Positives = 71/140 (50%), Gaps = 42/140 (30%)
 Frame = +1

Query: 7   MRTLCPNLDNEDALETVLEVPIPEESFDDTKINHNITSWQTMKSWIKPYSTDQRRQFSDY 186
           MR LCPN D ED L+TVLEVPIPEE F   K      SWQ +KSW+K  S  +R   S +
Sbjct: 1   MRKLCPNFDREDGLDTVLEVPIPEEMFPSHK--STSLSWQNVKSWMK--SNPERSATSIF 56

Query: 187 GGRNAEIQLLLGVV------------------------------------------GERA 240
           GGRN EIQLLLGVV                                          GE A
Sbjct: 57  GGRNXEIQLLLGVVGAPLIPLXVRCDRHPINQSIKDHPIEASMAKYIVQQYIAAAGGETA 116

Query: 241 LNLVDSMYAVGKVKMVASEF 300
           LN +DSMYA+GKV M+ASEF
Sbjct: 117 LNSIDSMYAMGKVTMMASEF 136


Top