BLASTX nr result

ID: Atractylodes22_contig00048662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048662
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   171   7e-41
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   170   1e-40
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   169   3e-40
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...   162   3e-38
gb|AAO23078.1| polyprotein [Glycine max]                              156   2e-36

>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  171 bits (432), Expect = 7e-41
 Identities = 80/118 (67%), Positives = 93/118 (78%)
 Frame = +3

Query: 3   VLVFFDDILVYSENEERHIEHLTSVLETLARHELYANGKKCEFGKNRMTYLGHIISSEGV 182
           VLVFFDDILVYS    +H+EHL  VLE LA++EL+AN KKCEFGK  + YLGHIIS+ GV
Sbjct: 608 VLVFFDDILVYSMGMTQHVEHLKKVLEVLAQNELFANKKKCEFGKQEVAYLGHIISARGV 667

Query: 183 AMDGDKVQAMVDWPLPTNLRELRGFLGLTGYYRKFVANYAQIAQPLTVQLRKDSFMWN 356
           AMD  K  AM++WP P  LRELRGFLGLTGYYR+FV  YA IA PLT QL+KD+F W+
Sbjct: 668 AMDNSKASAMLEWPQPQTLRELRGFLGLTGYYRRFVKGYATIASPLTQQLKKDAFQWS 725


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  170 bits (431), Expect = 1e-40
 Identities = 78/118 (66%), Positives = 96/118 (81%)
 Frame = +3

Query: 3    VLVFFDDILVYSENEERHIEHLTSVLETLARHELYANGKKCEFGKNRMTYLGHIISSEGV 182
            VLVF DDIL+YS ++E H+ HL  VL  LA+H L+ N KKCEFGK  + YLGH+IS  GV
Sbjct: 840  VLVFLDDILIYSRSDEEHVGHLEMVLGMLAQHALFVNKKKCEFGKREVAYLGHVISEGGV 899

Query: 183  AMDGDKVQAMVDWPLPTNLRELRGFLGLTGYYRKFVANYAQIAQPLTVQLRKDSFMWN 356
            AMD +KV+A+++W +P NLRELRGFLGLTGYYRKFVANYA IA+PLT QL+KD+F W+
Sbjct: 900  AMDTEKVKAVLEWEVPKNLRELRGFLGLTGYYRKFVANYAHIARPLTEQLKKDNFKWS 957


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  169 bits (427), Expect = 3e-40
 Identities = 82/118 (69%), Positives = 95/118 (80%)
 Frame = +3

Query: 3    VLVFFDDILVYSENEERHIEHLTSVLETLARHELYANGKKCEFGKNRMTYLGHIISSEGV 182
            VLVFFDDILVYS + E+H+ HL  VL  LA + L+AN KKCEFGK  + YLGHIISS+GV
Sbjct: 772  VLVFFDDILVYSTSLEQHMHHLNVVLGLLATNHLFANLKKCEFGKEEVAYLGHIISSKGV 831

Query: 183  AMDGDKVQAMVDWPLPTNLRELRGFLGLTGYYRKFVANYAQIAQPLTVQLRKDSFMWN 356
            AMD  KVQAM+DW +P+ LRELRGFLGLTGYYR+FV  YA IA PLT QL+KDSF W+
Sbjct: 832  AMDPSKVQAMMDWSIPSTLRELRGFLGLTGYYRRFVKGYASIAHPLTNQLKKDSFGWS 889


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score =  162 bits (410), Expect = 3e-38
 Identities = 75/118 (63%), Positives = 94/118 (79%)
 Frame = +3

Query: 3    VLVFFDDILVYSENEERHIEHLTSVLETLARHELYANGKKCEFGKNRMTYLGHIISSEGV 182
            VLVFFDDILVYS + + H++HL +VL+ L  H+ YAN KKC FG  R++YLGHIIS +GV
Sbjct: 864  VLVFFDDILVYSPDMKTHLKHLETVLQLLHLHQFYANFKKCTFGSTRISYLGHIISEQGV 923

Query: 183  AMDGDKVQAMVDWPLPTNLRELRGFLGLTGYYRKFVANYAQIAQPLTVQLRKDSFMWN 356
            A D +KV+AM+ WPLP ++ ELRGFLG TGYYR+FV NY QIA+PL  QL+K+SF WN
Sbjct: 924  ATDPEKVEAMLQWPLPKSVTELRGFLGFTGYYRRFVKNYGQIARPLRDQLKKNSFDWN 981


>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score =  156 bits (394), Expect = 2e-36
 Identities = 70/118 (59%), Positives = 93/118 (78%)
 Frame = +3

Query: 3    VLVFFDDILVYSENEERHIEHLTSVLETLARHELYANGKKCEFGKNRMTYLGHIISSEGV 182
            VLVFFDDIL+YS + + H++HL SVL+TL +H+L+A   KC FG   + YLGH +S  GV
Sbjct: 746  VLVFFDDILIYSASWKDHLKHLESVLQTLKQHQLFARLSKCSFGDTEVDYLGHKVSGLGV 805

Query: 183  AMDGDKVQAMVDWPLPTNLRELRGFLGLTGYYRKFVANYAQIAQPLTVQLRKDSFMWN 356
            +M+  KVQA++DWP P N+++LRGFLGLTGYYR+F+ +YA IA PLT  L+KDSF+WN
Sbjct: 806  SMENTKVQAVLDWPTPNNVKQLRGFLGLTGYYRRFIKSYANIAGPLTDLLQKDSFLWN 863


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