BLASTX nr result

ID: Atractylodes22_contig00048645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048645
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264382.1| PREDICTED: DNA damage response protein WSS1 ...   126   2e-27
ref|XP_002891861.1| zinc ion binding protein [Arabidopsis lyrata...   124   1e-26
gb|AAF79318.1|AC002304_11 F14J16.17 [Arabidopsis thaliana]            123   2e-26
ref|NP_564704.2| zinc ion binding protein [Arabidopsis thaliana]...   123   2e-26
ref|XP_002522770.1| conserved hypothetical protein [Ricinus comm...   123   2e-26

>ref|XP_002264382.1| PREDICTED: DNA damage response protein WSS1 [Vitis vinifera]
           gi|296089891|emb|CBI39710.3| unnamed protein product
           [Vitis vinifera]
          Length = 366

 Score =  126 bits (317), Expect = 2e-27
 Identities = 51/80 (63%), Positives = 68/80 (85%)
 Frame = +1

Query: 229 QHRVLWAKCMMCTLLNPALAPVCEVCGTQKPKAVEDKYKAWSCKFCTLENSVKVEKCGAC 408
           +  ++W +C +CTLLNP LAP+C+VC T+KPK V  KYK WSCKFCTLEN+V+++KCGAC
Sbjct: 288 EESIMW-ECGICTLLNPPLAPICKVCSTEKPKDVGIKYKVWSCKFCTLENNVELDKCGAC 346

Query: 409 GQWRYSYGQPIATPSPNVGT 468
           GQWRYS+G P++T +PN+GT
Sbjct: 347 GQWRYSHGPPVSTRAPNLGT 366


>ref|XP_002891861.1| zinc ion binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337703|gb|EFH68120.1| zinc ion binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 401

 Score =  124 bits (310), Expect = 1e-26
 Identities = 54/88 (61%), Positives = 68/88 (77%)
 Frame = +1

Query: 205 YKQSRNRMQHRVLWAKCMMCTLLNPALAPVCEVCGTQKPKAVEDKYKAWSCKFCTLENSV 384
           Y  +++R +   +W +C  CTLLNP+LAP+CE+C   KPK  E K+K WSCKFCTLEN V
Sbjct: 316 YNANQSR-EESTMW-ECAECTLLNPSLAPICELCTATKPKEKEMKHKVWSCKFCTLENEV 373

Query: 385 KVEKCGACGQWRYSYGQPIATPSPNVGT 468
           K+EKC ACGQWRYSYG P++T +PNVGT
Sbjct: 374 KLEKCEACGQWRYSYGAPLSTGAPNVGT 401


>gb|AAF79318.1|AC002304_11 F14J16.17 [Arabidopsis thaliana]
          Length = 450

 Score =  123 bits (309), Expect = 2e-26
 Identities = 54/88 (61%), Positives = 68/88 (77%)
 Frame = +1

Query: 205 YKQSRNRMQHRVLWAKCMMCTLLNPALAPVCEVCGTQKPKAVEDKYKAWSCKFCTLENSV 384
           Y  +++R +   +W +C  CTLLNP+LAP+CE+C   KPK  E K+K WSCKFCTLEN V
Sbjct: 365 YNANQSR-EESTMW-ECAECTLLNPSLAPICELCTAAKPKEREMKHKVWSCKFCTLENEV 422

Query: 385 KVEKCGACGQWRYSYGQPIATPSPNVGT 468
           K+EKC ACGQWRYSYG P++T +PNVGT
Sbjct: 423 KLEKCEACGQWRYSYGAPLSTGAPNVGT 450


>ref|NP_564704.2| zinc ion binding protein [Arabidopsis thaliana]
           gi|110738098|dbj|BAF00982.1| hypothetical protein
           [Arabidopsis thaliana] gi|119935912|gb|ABM06032.1|
           At1g55915 [Arabidopsis thaliana]
           gi|332195198|gb|AEE33319.1| zinc ion binding protein
           [Arabidopsis thaliana]
          Length = 404

 Score =  123 bits (309), Expect = 2e-26
 Identities = 54/88 (61%), Positives = 68/88 (77%)
 Frame = +1

Query: 205 YKQSRNRMQHRVLWAKCMMCTLLNPALAPVCEVCGTQKPKAVEDKYKAWSCKFCTLENSV 384
           Y  +++R +   +W +C  CTLLNP+LAP+CE+C   KPK  E K+K WSCKFCTLEN V
Sbjct: 319 YNANQSR-EESTMW-ECAECTLLNPSLAPICELCTAAKPKEREMKHKVWSCKFCTLENEV 376

Query: 385 KVEKCGACGQWRYSYGQPIATPSPNVGT 468
           K+EKC ACGQWRYSYG P++T +PNVGT
Sbjct: 377 KLEKCEACGQWRYSYGAPLSTGAPNVGT 404


>ref|XP_002522770.1| conserved hypothetical protein [Ricinus communis]
           gi|223538008|gb|EEF39621.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 404

 Score =  123 bits (309), Expect = 2e-26
 Identities = 50/76 (65%), Positives = 61/76 (80%)
 Frame = +1

Query: 241 LWAKCMMCTLLNPALAPVCEVCGTQKPKAVEDKYKAWSCKFCTLENSVKVEKCGACGQWR 420
           +W +C  CTLLNP LAP+C +C T+KPK    KYK WSCKFCTLENSVK++KC AC +WR
Sbjct: 330 MW-ECAACTLLNPPLAPICNLCSTEKPKDASAKYKIWSCKFCTLENSVKLDKCSACSEWR 388

Query: 421 YSYGQPIATPSPNVGT 468
           YSYG P++TP+PN GT
Sbjct: 389 YSYGPPVSTPAPNHGT 404


Top