BLASTX nr result

ID: Atractylodes22_contig00048641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048641
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33394.2| FAR1; Polynucleotidyl transferase, Ribonuclease H...   104   1e-27
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   108   2e-27
ref|XP_004169413.1| PREDICTED: uncharacterized protein LOC101228...    77   6e-17
emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]    75   1e-15
emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]    75   1e-15

>gb|ABD33394.2| FAR1; Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 657

 Score =  104 bits (260), Expect(3) = 1e-27
 Identities = 50/107 (46%), Positives = 68/107 (63%)
 Frame = +1

Query: 49  RF*SLADQKILRHLLQQRVALADQQNWIAKLLGYHFEVIYKPGKENSAADSLSRKFEDAE 228
           +F    DQK LR LLQQ++   DQQNW AKL GY F+++YKPG EN  AD+LSR  +  E
Sbjct: 223 KFTVCTDQKSLRQLLQQQITTMDQQNWAAKLFGYQFDILYKPGLENKGADALSRVHDSPE 282

Query: 229 LRVAISFPIWSQLSQIQEEVVNDKVLQGVILDLQKDSSSHPGLSCTR 369
           L   + +P W +  ++ EEV  D+VL+G+I  LQK   + PG +  R
Sbjct: 283 LHSLVHYPEWLEGKEVLEEVHKDEVLKGIISALQKGEPTKPGFAYRR 329



 Score = 36.2 bits (82), Expect(3) = 1e-27
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = +2

Query: 2   ALVLAIQHWRPYLLGRDFKV 61
           A+ L+IQHWRPYL+GR F V
Sbjct: 207 AVALSIQHWRPYLMGRKFTV 226



 Score = 27.3 bits (59), Expect(3) = 1e-27
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 366 KGVLLHKDRIVLAGNSK 416
           +GVL ++DR+VLA NSK
Sbjct: 329 RGVLFYEDRLVLAANSK 345


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  108 bits (270), Expect(2) = 2e-27
 Identities = 57/102 (55%), Positives = 68/102 (66%)
 Frame = +1

Query: 49   RF*SLADQKILRHLLQQRVALADQQNWIAKLLGYHFEVIYKPGKENSAADSLSRKFEDAE 228
            RF    DQK L+ LLQQRV  A+QQNW AKLLGY FE+IYKPGK N  AD+LSR  ED E
Sbjct: 738  RFVVSTDQKSLKQLLQQRVVTAEQQNWAAKLLGYDFEIIYKPGKLNKGADALSRVREDGE 797

Query: 229  LRVAISFPIWSQLSQIQEEVVNDKVLQGVILDLQKDSSSHPG 354
            L   I+   W     ++EE+  D  LQ +I DLQ+D+SS PG
Sbjct: 798  LCQGITSVQWKDEKLLREELSRDSQLQKIIGDLQRDASSRPG 839



 Score = 38.9 bits (89), Expect(2) = 2e-27
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +2

Query: 2   ALVLAIQHWRPYLLGRDFKV 61
           A+VLAIQHWRPYLLGR F V
Sbjct: 722 AVVLAIQHWRPYLLGRRFVV 741


>ref|XP_004169413.1| PREDICTED: uncharacterized protein LOC101228880 [Cucumis sativus]
          Length = 1099

 Score = 76.6 bits (187), Expect(2) = 6e-17
 Identities = 43/90 (47%), Positives = 56/90 (62%)
 Frame = +1

Query: 67   DQKILRHLLQQRVALADQQNWIAKLLGYHFEVIYKPGKENSAADSLSRKFEDAELRVAIS 246
            DQ+ L+ LL+QRV     Q WIAKLLGY FEV+YKPG EN  AD+LSR    A L   ++
Sbjct: 994  DQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVMYKPGLENKVADALSRVTLVAHLN-NLT 1052

Query: 247  FPIWSQLSQIQEEVVNDKVLQGVILDLQKD 336
             P    L  + EEV  D++L+ +I  +Q D
Sbjct: 1053 APTLVDLKVVMEEVKEDELLKEIINRVQND 1082



 Score = 35.4 bits (80), Expect(2) = 6e-17
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +2

Query: 2    ALVLAIQHWRPYLLGRDFKV 61
            A+VLA+Q WRPYLLGR F V
Sbjct: 972  AVVLAVQRWRPYLLGRTFIV 991


>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
          Length = 2822

 Score = 74.7 bits (182), Expect(2) = 1e-15
 Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
 Frame = +1

Query: 67   DQKILRHLLQQRVALADQQNWIAKLLGYHFEVIYKPGKENSAADSLSRKFEDAE--LRVA 240
            DQ+ L++LL+Q++    QQ WI KLLGY F V YK GKEN  AD+LSRK ED +     A
Sbjct: 879  DQQSLKYLLEQKMGTPLQQQWITKLLGYEFVVEYKQGKENKVADALSRKMEDQKEGKLYA 938

Query: 241  ISFPIWSQLSQIQEEVVNDKVLQGVILDLQKDS 339
            I+ P  + L Q++     D  LQ +I +L++ S
Sbjct: 939  ITAPANTWLEQLRTSYAIDPKLQQIIKNLEQGS 971



 Score = 33.1 bits (74), Expect(2) = 1e-15
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +2

Query: 2   ALVLAIQHWRPYLLGRDFKV 61
           ALVLA++ WR YLLG +FK+
Sbjct: 857 ALVLAVKKWRSYLLGHNFKI 876


>emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]
          Length = 1384

 Score = 75.5 bits (184), Expect(2) = 1e-15
 Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
 Frame = +1

Query: 49   RF*SLADQKILRHLLQQRVALADQQNWIAKLLGYHFEVIYKPGKENSAADSLSRKFEDAE 228
            +F    DQ+ L++LL+QR+   +QQ W+AKLLGY +E+ YKPG+ENSAAD+LSR      
Sbjct: 904  KFYXQTDQRSLKYLLEQRITTPEQQEWVAKLLGYDYEITYKPGRENSAADALSRVVSSPS 963

Query: 229  LRVAI--SFPIWSQL 267
            L        P+W ++
Sbjct: 964  LNALFVPQAPLWDEI 978



 Score = 32.3 bits (72), Expect(2) = 1e-15
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = +2

Query: 2   ALVLAIQHWRPYLLGRDF 55
           A+V AIQ WRPYLLGR F
Sbjct: 888 AIVHAIQTWRPYLLGRKF 905


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