BLASTX nr result

ID: Atractylodes22_contig00048609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048609
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68758.1| hypothetical protein VITISV_004671 [Vitis vinifera]   129   3e-28
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768...   128   5e-28
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi...   128   5e-28
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]   126   2e-27
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]   125   3e-27

>emb|CAN68758.1| hypothetical protein VITISV_004671 [Vitis vinifera]
          Length = 972

 Score =  129 bits (323), Expect = 3e-28
 Identities = 57/112 (50%), Positives = 85/112 (75%), Gaps = 13/112 (11%)
 Frame = -1

Query: 304 SVPKFDGDFEHWSLVMETLLRSKEYWAVIDSGFDQPTA-------------EQGLKDLKA 164
           ++P+FDG ++HWS++ME  LRSKEYW+++++G+D+P A             E  LKDLK 
Sbjct: 13  AIPRFDGHYDHWSMLMENFLRSKEYWSLVETGYDEPQANAAMTEAQQKRLDEMKLKDLKV 72

Query: 163 RNYLFQSINKQILKTIAKKDTAKQIWTAVKTRYQGNTRVKKAQLQRLRRDFE 8
           +NYLFQ+I++ IL+TI +K+T+KQIW ++K +Y+GN RVK++ LQ LRRDFE
Sbjct: 73  KNYLFQAIDRTILETILQKNTSKQIWDSMKKKYEGNARVKRSILQALRRDFE 124


>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis
           thaliana]
          Length = 1334

 Score =  128 bits (321), Expect = 5e-28
 Identities = 59/113 (52%), Positives = 83/113 (73%), Gaps = 13/113 (11%)
 Frame = -1

Query: 301 VPKFDGDFEHWSLVMETLLRSKEYWAVIDSGFDQPT-------------AEQGLKDLKAR 161
           +PKFDGD+EHW+++ME L+RSKE+W +I++G  +P              AE+ +KD K +
Sbjct: 9   IPKFDGDYEHWAMLMENLIRSKEWWDIIETGIPRPERNVILTGAQRTELAEKTVKDHKVK 68

Query: 160 NYLFQSINKQILKTIAKKDTAKQIWTAVKTRYQGNTRVKKAQLQRLRRDFEIL 2
           NYLF SI+K ILKTI +K+T+K +W ++K +YQGN RV+ AQLQRLRR FE+L
Sbjct: 69  NYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRLRRSFEVL 121


>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
           gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
           thaliana]
          Length = 1334

 Score =  128 bits (321), Expect = 5e-28
 Identities = 59/113 (52%), Positives = 83/113 (73%), Gaps = 13/113 (11%)
 Frame = -1

Query: 301 VPKFDGDFEHWSLVMETLLRSKEYWAVIDSGFDQPT-------------AEQGLKDLKAR 161
           +PKFDGD+EHW+++ME L+RSKE+W +I++G  +P              AE+ +KD K +
Sbjct: 9   IPKFDGDYEHWAMLMENLIRSKEWWDIIETGIPRPERNVILTGAQRTELAEKTVKDHKVK 68

Query: 160 NYLFQSINKQILKTIAKKDTAKQIWTAVKTRYQGNTRVKKAQLQRLRRDFEIL 2
           NYLF SI+K ILKTI +K+T+K +W ++K +YQGN RV+ AQLQRLRR FE+L
Sbjct: 69  NYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRLRRSFEVL 121


>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
          Length = 1265

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/116 (50%), Positives = 83/116 (71%), Gaps = 15/116 (12%)
 Frame = -1

Query: 304 SVPKFDGDFEHWSLVMETLLRSKEYWAVIDSGFDQPTAEQG---------------LKDL 170
           +VPKFDG ++HW+++ME  LRSKEYW +++SG   PT  +G               LKDL
Sbjct: 10  TVPKFDGHYDHWAMLMENFLRSKEYWGLVESGI--PTVAEGVVLTDAQRKNIDDQKLKDL 67

Query: 169 KARNYLFQSINKQILKTIAKKDTAKQIWTAVKTRYQGNTRVKKAQLQRLRRDFEIL 2
           KA+NYLFQ++++ +L+TI  KDTAK IW ++K +YQG TRVK+A LQ LR++FE+L
Sbjct: 68  KAKNYLFQALDRSVLETILNKDTAKNIWDSLKQKYQGTTRVKRAHLQALRKEFELL 123


>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
          Length = 1088

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/114 (50%), Positives = 82/114 (71%), Gaps = 13/114 (11%)
 Frame = -1

Query: 304 SVPKFDGDFEHWSLVMETLLRSKEYWAVIDSGFD-------------QPTAEQGLKDLKA 164
           ++P+FDG ++HWS++ME  LRSKEYW ++++G               +   +Q LKDLKA
Sbjct: 11  AIPRFDGHYDHWSMLMENFLRSKEYWNLVETGITAAAEGIDLSDAQKKALEDQKLKDLKA 70

Query: 163 RNYLFQSINKQILKTIAKKDTAKQIWTAVKTRYQGNTRVKKAQLQRLRRDFEIL 2
           +NYLFQ+I++ IL+TI KKDTAK IW ++K +YQG  RVK AQLQ LR++FE+L
Sbjct: 71  KNYLFQAIDRSILETILKKDTAKDIWDSLKQKYQGTARVKHAQLQALRKEFEVL 124


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