BLASTX nr result

ID: Atractylodes22_contig00048539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048539
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]   116   2e-24
ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containi...   115   4e-24
ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containi...    83   3e-14
ref|XP_002299231.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13

>emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]
          Length = 805

 Score =  116 bits (290), Expect = 2e-24
 Identities = 50/86 (58%), Positives = 68/86 (79%)
 Frame = +1

Query: 1   RIWRKLVDMRVTDYGAYVLAYNMYKEAGWKREAEEVRNMIVEFGTKKTPGCSMVEVDGVV 180
           R+W+KL DM V D G +VL+YN+Y+EAGW  EA+ VR +I E G KK PGCS++EVDG V
Sbjct: 711 RVWKKLADMGVADCGTHVLSYNLYREAGWDMEAKRVRRLISEXGMKKKPGCSIIEVDGTV 770

Query: 181 KEFVSGDIAHPQAPEIRRMLDSLFNV 258
           +EF++GD++H QAP+I + LDSL N+
Sbjct: 771 EEFLAGDLSHSQAPQICKTLDSLXNI 796


>ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 533

 Score =  115 bits (288), Expect = 4e-24
 Identities = 50/86 (58%), Positives = 68/86 (79%)
 Frame = +1

Query: 1   RIWRKLVDMRVTDYGAYVLAYNMYKEAGWKREAEEVRNMIVEFGTKKTPGCSMVEVDGVV 180
           R+W+KL DM V D G +VL+YN+Y+EAGW  EA+ VR +I E G KK PGCS++EVDG V
Sbjct: 439 RVWKKLADMGVADCGTHVLSYNLYREAGWDMEAKRVRRLISEAGMKKKPGCSIIEVDGTV 498

Query: 181 KEFVSGDIAHPQAPEIRRMLDSLFNV 258
           +EF++GD++H QAP+I + LDSL N+
Sbjct: 499 EEFLAGDLSHSQAPQICKTLDSLSNI 524


>ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 526

 Score =  110 bits (274), Expect = 2e-22
 Identities = 49/86 (56%), Positives = 67/86 (77%)
 Frame = +1

Query: 1   RIWRKLVDMRVTDYGAYVLAYNMYKEAGWKREAEEVRNMIVEFGTKKTPGCSMVEVDGVV 180
           R+W+KLVDM VTD G +VL YN+Y+EAGW  EA +VR+ I E G KK PGCS++EVD  V
Sbjct: 435 RVWKKLVDMGVTDCGTHVLTYNIYREAGWDVEANKVRSRIEEVGMKKKPGCSIIEVDNEV 494

Query: 181 KEFVSGDIAHPQAPEIRRMLDSLFNV 258
           +EF++GD +HPQA E+ ++LDS+  +
Sbjct: 495 EEFLAGDHSHPQAQEMCKLLDSILKM 520


>ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 528

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/83 (48%), Positives = 55/83 (66%)
 Frame = +1

Query: 1   RIWRKLVDMRVTDYGAYVLAYNMYKEAGWKREAEEVRNMIVEFGTKKTPGCSMVEVDGVV 180
           RIW KL  + + D G  VL+YN++ EAG +  A+EVR    E  +KK PGCS++ VDG V
Sbjct: 436 RIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKKIPGCSVIVVDGAV 495

Query: 181 KEFVSGDIAHPQAPEIRRMLDSL 249
           +EF++GD++HPQ   I  ML  L
Sbjct: 496 QEFLAGDLSHPQVQHICEMLGFL 518


>ref|XP_002299231.1| predicted protein [Populus trichocarpa] gi|222846489|gb|EEE84036.1|
           predicted protein [Populus trichocarpa]
          Length = 668

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/85 (43%), Positives = 55/85 (64%)
 Frame = +1

Query: 13  KLVDMRVTDYGAYVLAYNMYKEAGWKREAEEVRNMIVEFGTKKTPGCSMVEVDGVVKEFV 192
           KL+D+   D G YVL  NMY+EAG   EA+ +R M++E G +KTPG S +EV+G++ EF+
Sbjct: 581 KLLDLDPHDSGIYVLLANMYREAGKWEEAQNIRKMMMERGVEKTPGSSSIEVNGIINEFI 640

Query: 193 SGDIAHPQAPEIRRMLDSLFNVAGV 267
             D +HPQ+ +I    + +    GV
Sbjct: 641 VRDKSHPQSEQIYECFNLINKTIGV 665


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