BLASTX nr result

ID: Atractylodes22_contig00048483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048483
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   214   8e-54
ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   213   1e-53
emb|CBI26570.3| unnamed protein product [Vitis vinifera]              213   1e-53
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,...   213   1e-53
ref|XP_002327945.1| predicted protein [Populus trichocarpa] gi|2...   207   7e-52

>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  214 bits (544), Expect = 8e-54
 Identities = 104/125 (83%), Positives = 113/125 (90%)
 Frame = +3

Query: 3   DRQVQMTPTDFCFLVKGVGKSNWQRALEVYEWLNLRKWYSPNTRMLATILAVLGKANQEA 182
           DR+VQMTPTDFCF+VK VG+S+WQRALEVYEWLNLR WYSPN RMLATIL+VLGKANQEA
Sbjct: 178 DRKVQMTPTDFCFVVKWVGQSSWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEA 237

Query: 183 LAVEIFERCEEGIDSSVQVYNAMMGVYARSGRFGKVQEMLDLMRQRGCEPDLVSFNTLIN 362
           LAVEIF R E    ++VQVYNAMMGVYAR+GRF KVQE+LDLMR RGCEPDLVSFNTLIN
Sbjct: 238 LAVEIFARAEAAXGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLIN 297

Query: 363 ARFKS 377
           AR KS
Sbjct: 298 ARLKS 302


>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  213 bits (543), Expect = 1e-53
 Identities = 104/125 (83%), Positives = 113/125 (90%)
 Frame = +3

Query: 3   DRQVQMTPTDFCFLVKGVGKSNWQRALEVYEWLNLRKWYSPNTRMLATILAVLGKANQEA 182
           DR+VQMTPTDFCF+VK VG+S+WQRALEVYEWLNLR WYSPN RMLATIL+VLGKANQEA
Sbjct: 146 DRKVQMTPTDFCFVVKWVGQSSWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEA 205

Query: 183 LAVEIFERCEEGIDSSVQVYNAMMGVYARSGRFGKVQEMLDLMRQRGCEPDLVSFNTLIN 362
           LAVEIF R E    ++VQVYNAMMGVYAR+GRF KVQE+LDLMR RGCEPDLVSFNTLIN
Sbjct: 206 LAVEIFARAEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLIN 265

Query: 363 ARFKS 377
           AR KS
Sbjct: 266 ARLKS 270


>emb|CBI26570.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score =  213 bits (543), Expect = 1e-53
 Identities = 104/125 (83%), Positives = 113/125 (90%)
 Frame = +3

Query: 3   DRQVQMTPTDFCFLVKGVGKSNWQRALEVYEWLNLRKWYSPNTRMLATILAVLGKANQEA 182
           DR+VQMTPTDFCF+VK VG+S+WQRALEVYEWLNLR WYSPN RMLATIL+VLGKANQEA
Sbjct: 121 DRKVQMTPTDFCFVVKWVGQSSWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEA 180

Query: 183 LAVEIFERCEEGIDSSVQVYNAMMGVYARSGRFGKVQEMLDLMRQRGCEPDLVSFNTLIN 362
           LAVEIF R E    ++VQVYNAMMGVYAR+GRF KVQE+LDLMR RGCEPDLVSFNTLIN
Sbjct: 181 LAVEIFARAEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLIN 240

Query: 363 ARFKS 377
           AR KS
Sbjct: 241 ARLKS 245


>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1429

 Score =  213 bits (543), Expect = 1e-53
 Identities = 103/125 (82%), Positives = 113/125 (90%)
 Frame = +3

Query: 3   DRQVQMTPTDFCFLVKGVGKSNWQRALEVYEWLNLRKWYSPNTRMLATILAVLGKANQEA 182
           D +VQMTPTDFCF+VK VG+ NWQRALEV+EWLNLR WYSPN RMLATILAVLGKANQEA
Sbjct: 134 DSKVQMTPTDFCFVVKWVGQENWQRALEVFEWLNLRHWYSPNARMLATILAVLGKANQEA 193

Query: 183 LAVEIFERCEEGIDSSVQVYNAMMGVYARSGRFGKVQEMLDLMRQRGCEPDLVSFNTLIN 362
           LAVEIF R E  +D++VQVYNAMMGVYAR+GRF KVQ MLDLMR+RGCEPDLVSFNTLIN
Sbjct: 194 LAVEIFIRAESTVDNTVQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLIN 253

Query: 363 ARFKS 377
           AR K+
Sbjct: 254 ARLKA 258


>ref|XP_002327945.1| predicted protein [Populus trichocarpa] gi|222837354|gb|EEE75733.1|
           predicted protein [Populus trichocarpa]
          Length = 1450

 Score =  207 bits (527), Expect = 7e-52
 Identities = 96/125 (76%), Positives = 111/125 (88%)
 Frame = +3

Query: 3   DRQVQMTPTDFCFLVKGVGKSNWQRALEVYEWLNLRKWYSPNTRMLATILAVLGKANQEA 182
           DR+VQMTPTDFCF+VK VG+ +W RA EVYEWLNLR WYSPN RML+TILAVLGKANQE 
Sbjct: 180 DRKVQMTPTDFCFVVKSVGQESWHRAFEVYEWLNLRHWYSPNARMLSTILAVLGKANQEP 239

Query: 183 LAVEIFERCEEGIDSSVQVYNAMMGVYARSGRFGKVQEMLDLMRQRGCEPDLVSFNTLIN 362
           LAVE+F R E  ++++V+VYNAMMGVYARSG+F KVQE+ DLMR+RGCEPDLVSFNTLIN
Sbjct: 240 LAVEVFTRAEPSVENTVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLIN 299

Query: 363 ARFKS 377
           AR K+
Sbjct: 300 ARLKA 304


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