BLASTX nr result
ID: Atractylodes22_contig00048447
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00048447
(302 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containi... 100 9e-20
emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera] 100 9e-20
ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containi... 96 3e-18
ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containi... 96 3e-18
ref|XP_002513505.1| pentatricopeptide repeat-containing protein,... 89 5e-16
>ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 100 bits (250), Expect = 9e-20
Identities = 44/100 (44%), Positives = 68/100 (68%)
Frame = -2
Query: 301 YELFNSKPTRDVAMWNSMLSCYVESRFIEESIKLLTKMQLEGIQLNERTIVIMLPLCSDI 122
++LF S P RD +WNSM+S Y EE++ L +MQ EG++ +ERT+VIML +C ++
Sbjct: 310 HQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEEL 369
Query: 121 SDGLVNGKSLHAYAFKIGKERNTHIRNSLVNLYVSLNCIE 2
+ GL+ GKSLHA+ K G + + N+L+++Y LNC+E
Sbjct: 370 ASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVE 409
Score = 55.8 bits (133), Expect = 3e-06
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = -2
Query: 295 LFNSKPTRDVAMWNSMLSCYVESRFIEESIKLLTKMQLEGIQLNERTIVIMLPLCSDISD 116
+F++ RDV +WN+M+ YV EE++ L+ +M E ++ N RT+V +L C S+
Sbjct: 110 VFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASE 169
Query: 115 GLVNGKSLHAYAFKIGK-ERNTHIRNSLVNLYV 20
L G+ +H Y + G + N H+ +L+ Y+
Sbjct: 170 -LRLGRGVHGYCLRNGMFDSNPHVATALIGFYL 201
>emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 100 bits (250), Expect = 9e-20
Identities = 44/100 (44%), Positives = 68/100 (68%)
Frame = -2
Query: 301 YELFNSKPTRDVAMWNSMLSCYVESRFIEESIKLLTKMQLEGIQLNERTIVIMLPLCSDI 122
++LF S P RD +WNSM+S Y EE++ L +MQ EG++ +ERT+VIML +C ++
Sbjct: 317 HQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEEL 376
Query: 121 SDGLVNGKSLHAYAFKIGKERNTHIRNSLVNLYVSLNCIE 2
+ GL+ GKSLHA+ K G + + N+L+++Y LNC+E
Sbjct: 377 ASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVE 416
Score = 55.8 bits (133), Expect = 3e-06
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = -2
Query: 295 LFNSKPTRDVAMWNSMLSCYVESRFIEESIKLLTKMQLEGIQLNERTIVIMLPLCSDISD 116
+F++ RDV +WN+M+ YV EE++ L+ +M E ++ N RT+V +L C S+
Sbjct: 117 VFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASE 176
Query: 115 GLVNGKSLHAYAFKIGK-ERNTHIRNSLVNLYV 20
L G+ +H Y + G + N H+ +L+ Y+
Sbjct: 177 -LRLGRGVHGYCLRNGMFDSNPHVATALIGFYL 208
>ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 95.9 bits (237), Expect = 3e-18
Identities = 47/99 (47%), Positives = 69/99 (69%)
Frame = -2
Query: 301 YELFNSKPTRDVAMWNSMLSCYVESRFIEESIKLLTKMQLEGIQLNERTIVIMLPLCSDI 122
+ LFN+ PT D A+WNSM+S Y+ F E+I L KM+LE I+ + RTI IML LC+D+
Sbjct: 317 WALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDL 376
Query: 121 SDGLVNGKSLHAYAFKIGKERNTHIRNSLVNLYVSLNCI 5
+DG + G+ LHA+A K G E + ++ N+L+++YV N I
Sbjct: 377 NDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQI 415
Score = 65.9 bits (159), Expect = 3e-09
Identities = 36/88 (40%), Positives = 51/88 (57%)
Frame = -2
Query: 271 DVAMWNSMLSCYVESRFIEESIKLLTKMQLEGIQLNERTIVIMLPLCSDISDGLVNGKSL 92
DV WN+M+S + +S F ++ +L M I+ N TIV +L C D SD LV G+S+
Sbjct: 429 DVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSD-LVFGRSI 487
Query: 91 HAYAFKIGKERNTHIRNSLVNLYVSLNC 8
H +A K G E NT + SL +Y+ NC
Sbjct: 488 HGFAIKNGLEINTSLNTSLTEMYI--NC 513
>ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 95.9 bits (237), Expect = 3e-18
Identities = 47/99 (47%), Positives = 69/99 (69%)
Frame = -2
Query: 301 YELFNSKPTRDVAMWNSMLSCYVESRFIEESIKLLTKMQLEGIQLNERTIVIMLPLCSDI 122
+ LFN+ PT D A+WNSM+S Y+ F E+I L KM+LE I+ + RTI IML LC+D+
Sbjct: 317 WALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDL 376
Query: 121 SDGLVNGKSLHAYAFKIGKERNTHIRNSLVNLYVSLNCI 5
+DG + G+ LHA+A K G E + ++ N+L+++YV N I
Sbjct: 377 NDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQI 415
Score = 65.9 bits (159), Expect = 3e-09
Identities = 36/88 (40%), Positives = 51/88 (57%)
Frame = -2
Query: 271 DVAMWNSMLSCYVESRFIEESIKLLTKMQLEGIQLNERTIVIMLPLCSDISDGLVNGKSL 92
DV WN+M+S + +S F ++ +L M I+ N TIV +L C D SD LV G+S+
Sbjct: 429 DVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSD-LVFGRSI 487
Query: 91 HAYAFKIGKERNTHIRNSLVNLYVSLNC 8
H +A K G E NT + SL +Y+ NC
Sbjct: 488 HGFAIKNGLEINTSLNTSLTEMYI--NC 513
>ref|XP_002513505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547413|gb|EEF48908.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 474
Score = 88.6 bits (218), Expect = 5e-16
Identities = 44/98 (44%), Positives = 65/98 (66%)
Frame = -2
Query: 295 LFNSKPTRDVAMWNSMLSCYVESRFIEESIKLLTKMQLEGIQLNERTIVIMLPLCSDISD 116
LF++ TRDVA+WNSM+S Y++ + EE+ L + M+ + + +ERTI +ML LC++ +D
Sbjct: 105 LFDNVITRDVALWNSMISAYIDYAYYEEANSLFSTMRTKTRE-DERTIAVMLSLCAEAAD 163
Query: 115 GLVNGKSLHAYAFKIGKERNTHIRNSLVNLYVSLNCIE 2
GL GKSLHA A K G + N+L+ +Y LNC E
Sbjct: 164 GLKMGKSLHALACKNGMRMDNSTANALLRMYADLNCAE 201