BLASTX nr result

ID: Atractylodes22_contig00048423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048423
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]        152   4e-35
emb|CAX68204.1| retrotransposon ribonuclease H [Helianthus annuus]    152   4e-35
emb|CAX68203.1| retrotransposon ribonuclease H [Helianthus annuus]    152   4e-35
emb|CAX68199.1| retrotransposon ribonuclease H [Helianthus annuu...   152   4e-35
emb|CAX68198.1| retrotransposon ribonuclease H [Helianthus annuus]    150   1e-34

>emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
          Length = 1358

 Score =  152 bits (383), Expect = 4e-35
 Identities = 71/93 (76%), Positives = 79/93 (84%)
 Frame = -1

Query: 279  IYTIIGVAVSWTSKKQTCIAHSTMEAKFIALATAGKTAEWIRDLLVDVRIWTHPIQSIPM 100
            I+T+ G AVSW SKKQTCIAHSTMEA+ IALA AGK AEWIRDLL D+R+W  P+  IPM
Sbjct: 1224 IFTLAGGAVSWASKKQTCIAHSTMEAELIALAAAGKEAEWIRDLLTDIRLWDVPMPCIPM 1283

Query: 99   YCDSEATLAKVYNTVYNGKSRHLRLRHNYVRQL 1
            YCDSEATL+KVYN VYNG SRH+ LRHNYVRQL
Sbjct: 1284 YCDSEATLSKVYNAVYNGGSRHIGLRHNYVRQL 1316


>emb|CAX68204.1| retrotransposon ribonuclease H [Helianthus annuus]
          Length = 207

 Score =  152 bits (383), Expect = 4e-35
 Identities = 71/93 (76%), Positives = 79/93 (84%)
 Frame = -1

Query: 279 IYTIIGVAVSWTSKKQTCIAHSTMEAKFIALATAGKTAEWIRDLLVDVRIWTHPIQSIPM 100
           I+T+ G AVSW SKKQTCIAHSTMEA+ IALA AGK AEWIRDLL D+R+W  P+  IPM
Sbjct: 84  IFTLAGGAVSWASKKQTCIAHSTMEAELIALAAAGKEAEWIRDLLTDIRLWDVPMPCIPM 143

Query: 99  YCDSEATLAKVYNTVYNGKSRHLRLRHNYVRQL 1
           YCDSEATL+KVYN VYNG SRH+ LRHNYVRQL
Sbjct: 144 YCDSEATLSKVYNAVYNGGSRHIGLRHNYVRQL 176


>emb|CAX68203.1| retrotransposon ribonuclease H [Helianthus annuus]
          Length = 207

 Score =  152 bits (383), Expect = 4e-35
 Identities = 71/93 (76%), Positives = 79/93 (84%)
 Frame = -1

Query: 279 IYTIIGVAVSWTSKKQTCIAHSTMEAKFIALATAGKTAEWIRDLLVDVRIWTHPIQSIPM 100
           I+T+ G AVSW SKKQTCIAHSTMEA+ IALA AGK AEWIRDLL D+R+W  P+  IPM
Sbjct: 84  IFTLAGGAVSWASKKQTCIAHSTMEAELIALAAAGKEAEWIRDLLTDIRLWDVPMPCIPM 143

Query: 99  YCDSEATLAKVYNTVYNGKSRHLRLRHNYVRQL 1
           YCDSEATL+KVYN VYNG SRH+ LRHNYVRQL
Sbjct: 144 YCDSEATLSKVYNAVYNGGSRHIGLRHNYVRQL 176


>emb|CAX68199.1| retrotransposon ribonuclease H [Helianthus annuus]
           gi|295799965|emb|CAX68200.1| retrotransposon
           ribonuclease H [Helianthus annuus]
           gi|295799977|emb|CAX68206.1| retrotransposon
           ribonuclease H [Helianthus annuus]
          Length = 207

 Score =  152 bits (383), Expect = 4e-35
 Identities = 71/93 (76%), Positives = 79/93 (84%)
 Frame = -1

Query: 279 IYTIIGVAVSWTSKKQTCIAHSTMEAKFIALATAGKTAEWIRDLLVDVRIWTHPIQSIPM 100
           I+T+ G AVSW SKKQTCIAHSTMEA+ IALA AGK AEWIRDLL D+R+W  P+  IPM
Sbjct: 84  IFTLAGGAVSWASKKQTCIAHSTMEAELIALAAAGKEAEWIRDLLTDIRLWDVPMPCIPM 143

Query: 99  YCDSEATLAKVYNTVYNGKSRHLRLRHNYVRQL 1
           YCDSEATL+KVYN VYNG SRH+ LRHNYVRQL
Sbjct: 144 YCDSEATLSKVYNAVYNGGSRHIGLRHNYVRQL 176


>emb|CAX68198.1| retrotransposon ribonuclease H [Helianthus annuus]
          Length = 207

 Score =  150 bits (379), Expect = 1e-34
 Identities = 70/93 (75%), Positives = 78/93 (83%)
 Frame = -1

Query: 279 IYTIIGVAVSWTSKKQTCIAHSTMEAKFIALATAGKTAEWIRDLLVDVRIWTHPIQSIPM 100
           I+T+ G AVSW SKKQTCIAHSTMEA+ IALA AGK AEWIRDLL D+R+W  P+  IPM
Sbjct: 84  IFTLAGGAVSWASKKQTCIAHSTMEAELIALAAAGKEAEWIRDLLTDIRLWDVPMPCIPM 143

Query: 99  YCDSEATLAKVYNTVYNGKSRHLRLRHNYVRQL 1
           YCDSEATL+K YN VYNG SRH+ LRHNYVRQL
Sbjct: 144 YCDSEATLSKAYNAVYNGGSRHIGLRHNYVRQL 176


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