BLASTX nr result

ID: Atractylodes22_contig00048379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048379
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242...   206   2e-51
ref|XP_002520546.1| conserved hypothetical protein [Ricinus comm...   196   2e-48
ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|2...   192   3e-47
emb|CBI29073.3| unnamed protein product [Vitis vinifera]              187   1e-45
ref|NP_193700.2| Mitochondrial transcription termination factor ...   186   1e-45

>ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242606 [Vitis vinifera]
          Length = 564

 Score =  206 bits (523), Expect = 2e-51
 Identities = 101/140 (72%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
 Frame = -3

Query: 411 AIEH---QDSNTFIERRNFLLRLGYTENSDELAKALRKFRGRGDQLQERFDCLVEAGLDY 241
           ++EH   Q  +  +E+  FLLRLGY ENSDE+ KAL+ FRGRGDQLQERFDCLV+AGLD 
Sbjct: 396 SMEHVTCQSPSKHLEKTTFLLRLGYVENSDEMFKALKLFRGRGDQLQERFDCLVQAGLDC 455

Query: 240 NVVSSMIKRAPSVLNQTKDLLEKKIDCLQNRLGYPLEAVIAFPSFLCYDIQRINLRFSMY 61
           NVVS+MIK+APSVLNQTK ++EKKIDCL+N LGYPL++V+AFPS+LCYDI+RINLRFSMY
Sbjct: 456 NVVSNMIKQAPSVLNQTKYVIEKKIDCLRNCLGYPLQSVVAFPSYLCYDIERINLRFSMY 515

Query: 60  LWLLERGAAKPKLSLSTILA 1
           +WL ++GAAK  LSLSTILA
Sbjct: 516 VWLRDKGAAKSNLSLSTILA 535


>ref|XP_002520546.1| conserved hypothetical protein [Ricinus communis]
           gi|223540260|gb|EEF41832.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 374

 Score =  196 bits (498), Expect = 2e-48
 Identities = 94/133 (70%), Positives = 114/133 (85%)
 Frame = -3

Query: 399 QDSNTFIERRNFLLRLGYTENSDELAKALRKFRGRGDQLQERFDCLVEAGLDYNVVSSMI 220
           +D +   ++  FLLRLGY ENSDE+ +AL+KFRGRGDQLQER+DCLV+AGLD NVVSS+I
Sbjct: 211 EDQSKKRDKVAFLLRLGYVENSDEMMRALKKFRGRGDQLQERYDCLVQAGLDCNVVSSLI 270

Query: 219 KRAPSVLNQTKDLLEKKIDCLQNRLGYPLEAVIAFPSFLCYDIQRINLRFSMYLWLLERG 40
           + AP VLNQTKD++EKKIDCL   LGYPL +V+AFP++LCYDI+RIN RF MY+WL +RG
Sbjct: 271 RHAPMVLNQTKDVIEKKIDCLTRCLGYPLTSVVAFPTYLCYDIERINHRFRMYVWLKDRG 330

Query: 39  AAKPKLSLSTILA 1
           AAKP LSLSTILA
Sbjct: 331 AAKPMLSLSTILA 343


>ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|222875180|gb|EEF12311.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score =  192 bits (487), Expect = 3e-47
 Identities = 95/136 (69%), Positives = 113/136 (83%)
 Frame = -3

Query: 408 IEHQDSNTFIERRNFLLRLGYTENSDELAKALRKFRGRGDQLQERFDCLVEAGLDYNVVS 229
           +  Q     +E+  FLLRLGY ENSDE+A+AL+ FRGRGDQLQERFDC V+AGLD NVVS
Sbjct: 412 LSSQGPTNKLEKTAFLLRLGYVENSDEMARALKMFRGRGDQLQERFDCPVQAGLDCNVVS 471

Query: 228 SMIKRAPSVLNQTKDLLEKKIDCLQNRLGYPLEAVIAFPSFLCYDIQRINLRFSMYLWLL 49
           S IK+AP VLNQTKD++EKKIDCL N LG  + +++AFPS+LCYD++RINLRF MY WL 
Sbjct: 472 SFIKQAPMVLNQTKDVIEKKIDCLTN-LGCSVNSLVAFPSYLCYDMERINLRFRMYTWLK 530

Query: 48  ERGAAKPKLSLSTILA 1
           E+GAAKPKLSLSTILA
Sbjct: 531 EKGAAKPKLSLSTILA 546


>emb|CBI29073.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  187 bits (474), Expect = 1e-45
 Identities = 87/114 (76%), Positives = 105/114 (92%)
 Frame = -3

Query: 381 IERRNFLLRLGYTENSDELAKALRKFRGRGDQLQERFDCLVEAGLDYNVVSSMIKRAPSV 202
           +E+  FLLRLGY ENSDE+ KAL+ FRGRGDQLQERFDCLV+AGLD NVVS+MIK+APSV
Sbjct: 417 LEKTTFLLRLGYVENSDEMFKALKLFRGRGDQLQERFDCLVQAGLDCNVVSNMIKQAPSV 476

Query: 201 LNQTKDLLEKKIDCLQNRLGYPLEAVIAFPSFLCYDIQRINLRFSMYLWLLERG 40
           LNQTK ++EKKIDCL+N LGYPL++V+AFPS+LCYDI+RINLRFSMY+WL ++G
Sbjct: 477 LNQTKYVIEKKIDCLRNCLGYPLQSVVAFPSYLCYDIERINLRFSMYVWLRDKG 530


>ref|NP_193700.2| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|332658810|gb|AEE84210.1|
           Mitochondrial transcription termination factor family
           protein [Arabidopsis thaliana]
          Length = 575

 Score =  186 bits (473), Expect = 1e-45
 Identities = 87/132 (65%), Positives = 111/132 (84%)
 Frame = -3

Query: 399 QDSNTFIERRNFLLRLGYTENSDELAKALRKFRGRGDQLQERFDCLVEAGLDYNVVSSMI 220
           +DS  ++E+  FLLRLGY ENSDE+ KAL++FRGRGDQLQERFDCLV+AGL+YNVV+ +I
Sbjct: 414 EDSRKYLEKTEFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNYNVVTEII 473

Query: 219 KRAPSVLNQTKDLLEKKIDCLQNRLGYPLEAVIAFPSFLCYDIQRINLRFSMYLWLLERG 40
           + AP +LN +KD++EKKI  L   LGYP+E+++ FP++LCYD+QRI+ RFSMYLWL ER 
Sbjct: 474 RHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLCYDMQRIHHRFSMYLWLRERD 533

Query: 39  AAKPKLSLSTIL 4
           AAKP LS STIL
Sbjct: 534 AAKPMLSPSTIL 545


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