BLASTX nr result

ID: Atractylodes22_contig00048350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048350
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN33810.1| cyclin d protein [Cucumis melo subsp. melo]             75   6e-12
ref|XP_004150260.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus...    72   6e-11
ref|XP_002298781.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002267356.1| PREDICTED: cyclin-D4-1 [Vitis vinifera] gi|2...    63   3e-08
emb|CAN66965.1| hypothetical protein VITISV_043227 [Vitis vinifera]    63   3e-08

>gb|ADN33810.1| cyclin d protein [Cucumis melo subsp. melo]
          Length = 347

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/91 (45%), Positives = 53/91 (58%)
 Frame = -1

Query: 276 PAHKSPAMSFTTTSTRHSLPICSLFQTMSHHSTATLCCSPIPDDSIVDSLIASEPHHCPS 97
           P H SPA S +++S+  S        + SH   +     PI DDS + +L+ SE HH P 
Sbjct: 5   PHHHSPASSSSSSSSSSSS------SSSSHFLCSYAPDFPISDDSPISTLLQSELHHMPR 58

Query: 96  PDYLLRCQHRAILLTHRQDSINWILSAHSHY 4
            DYL RC+  +I +T RQDSINWIL  HSHY
Sbjct: 59  IDYLRRCRDHSIDVTARQDSINWILKVHSHY 89


>ref|XP_004150260.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]
           gi|449521665|ref|XP_004167850.1| PREDICTED:
           cyclin-D1-1-like [Cucumis sativus]
          Length = 330

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/78 (46%), Positives = 46/78 (58%)
 Frame = -1

Query: 237 STRHSLPICSLFQTMSHHSTATLCCSPIPDDSIVDSLIASEPHHCPSPDYLLRCQHRAIL 58
           S  H  P  S   + SH   ++    P+ DDS + +L+ S+ HH P  DYL RC+  +I 
Sbjct: 4   SPHHHSPASSSSSSSSHFLCSSAPDFPLSDDSPIFTLLQSQLHHMPRLDYLRRCRDHSID 63

Query: 57  LTHRQDSINWILSAHSHY 4
           LT RQDSINWIL  HSHY
Sbjct: 64  LTARQDSINWILMVHSHY 81


>ref|XP_002298781.1| predicted protein [Populus trichocarpa] gi|222846039|gb|EEE83586.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/57 (50%), Positives = 39/57 (68%)
 Frame = -1

Query: 174 TLCCSPIPDDSIVDSLIASEPHHCPSPDYLLRCQHRAILLTHRQDSINWILSAHSHY 4
           ++  SP  D++ +  LI SE H  P  DYL RC+HR+I +T RQDSINWIL  ++HY
Sbjct: 89  SIIVSPPSDENTITKLIDSESHFMPLSDYLHRCRHRSIDITARQDSINWILKVYAHY 145


>ref|XP_002267356.1| PREDICTED: cyclin-D4-1 [Vitis vinifera]
           gi|296083031|emb|CBI22435.3| unnamed protein product
           [Vitis vinifera]
          Length = 354

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/53 (50%), Positives = 36/53 (67%)
 Frame = -1

Query: 162 SPIPDDSIVDSLIASEPHHCPSPDYLLRCQHRAILLTHRQDSINWILSAHSHY 4
           SP  D+S ++    SEP H P  DYL RC+ R++ +T RQDSINWIL  H++Y
Sbjct: 48  SPPFDESTIERFFGSEPDHRPMEDYLCRCRDRSVDVTSRQDSINWILKVHAYY 100


>emb|CAN66965.1| hypothetical protein VITISV_043227 [Vitis vinifera]
          Length = 334

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/53 (50%), Positives = 36/53 (67%)
 Frame = -1

Query: 162 SPIPDDSIVDSLIASEPHHCPSPDYLLRCQHRAILLTHRQDSINWILSAHSHY 4
           SP  D+S ++    SEP H P  DYL RC+ R++ +T RQDSINWIL  H++Y
Sbjct: 48  SPPFDESTIERFFGSEPDHRPMEDYLCRCRDRSVDVTSRQDSINWILKVHAYY 100


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