BLASTX nr result

ID: Atractylodes22_contig00048302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048302
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24766.3| unnamed protein product [Vitis vinifera]               55   3e-12
emb|CAN78555.1| hypothetical protein VITISV_042207 [Vitis vinifera]    53   4e-11
ref|XP_002276188.2| PREDICTED: glucose-1-phosphate adenylyltrans...    53   4e-11
ref|XP_002310375.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06
ref|ZP_07110192.1| glucose-1-phosphate adenylyltransferase [Osci...    39   6e-06

>emb|CBI24766.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score = 55.5 bits (132), Expect(2) = 3e-12
 Identities = 26/43 (60%), Positives = 31/43 (72%)
 Frame = +2

Query: 260 NDGFSEKFSGMGIYVMNRHVMIKLLKESFPKANDLKYEVIPGA 388
           +   S+ FSGMGIYV+ + +MIKLL E FPKAN    EVIPGA
Sbjct: 243 SSSLSQYFSGMGIYVVKKEIMIKLLSEHFPKANGFGSEVIPGA 285



 Score = 40.8 bits (94), Expect(2) = 3e-12
 Identities = 24/71 (33%), Positives = 37/71 (52%)
 Frame = +1

Query: 1   AHRNNKADITVAVLDSVRDHNTGFGSFKLDLENRVVGFREEPELMSVMPSSVKWHTFNR* 180
           AHR +KADIT+  L +     TG G  +++ EN+VV F +  E       SV +      
Sbjct: 186 AHRQSKADITIVALSAEISRETGLGILEVNSENQVVEFSKRSEKEPATIISVSYF----- 240

Query: 181 SMSLLLTEYYS 213
            +S  L++Y+S
Sbjct: 241 GLSSSLSQYFS 251


>emb|CAN78555.1| hypothetical protein VITISV_042207 [Vitis vinifera]
          Length = 681

 Score = 52.8 bits (125), Expect(2) = 4e-11
 Identities = 25/43 (58%), Positives = 30/43 (69%)
 Frame = +2

Query: 260 NDGFSEKFSGMGIYVMNRHVMIKLLKESFPKANDLKYEVIPGA 388
           ND   +K + MGIYV+ + +MIKLL E FPKAN    EVIPGA
Sbjct: 468 NDNGYKKLASMGIYVVKKEIMIKLLSEHFPKANGFGSEVIPGA 510



 Score = 39.7 bits (91), Expect(2) = 4e-11
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = +1

Query: 1   AHRNNKADITVAVLDSVRDHNTGFGSFKLDLENRVVGFREEPELMSVMPSSVK 159
           AHR +KADIT+  L +     TG G  +++ EN+VV F +  E       SVK
Sbjct: 410 AHRQSKADITIVALSAEISRETGLGILEVNSENQVVEFSKRSEKEPATIISVK 462


>ref|XP_002276188.2| PREDICTED: glucose-1-phosphate adenylyltransferase small subunit 1,
           chloroplastic-like [Vitis vinifera]
          Length = 483

 Score = 52.8 bits (125), Expect(2) = 4e-11
 Identities = 25/43 (58%), Positives = 30/43 (69%)
 Frame = +2

Query: 260 NDGFSEKFSGMGIYVMNRHVMIKLLKESFPKANDLKYEVIPGA 388
           ND   +K + MGIYV+ + +MIKLL E FPKAN    EVIPGA
Sbjct: 250 NDNGYKKLASMGIYVVKKEIMIKLLSEHFPKANGFGSEVIPGA 292



 Score = 39.7 bits (91), Expect(2) = 4e-11
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = +1

Query: 1   AHRNNKADITVAVLDSVRDHNTGFGSFKLDLENRVVGFREEPELMSVMPSSVK 159
           AHR +KADIT+  L +     TG G  +++ EN+VV F +  E       SVK
Sbjct: 192 AHRQSKADITIVALSAEISRETGLGILEVNSENQVVEFSKRSEKEPATIISVK 244


>ref|XP_002310375.1| predicted protein [Populus trichocarpa] gi|222853278|gb|EEE90825.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/44 (59%), Positives = 31/44 (70%)
 Frame = +2

Query: 257 FNDGFSEKFSGMGIYVMNRHVMIKLLKESFPKANDLKYEVIPGA 388
           FND    K S MGIY++NR+ M KLL E FP+AN+   EVIPGA
Sbjct: 202 FNDNAYRKLSSMGIYLVNRNTMTKLLNEYFPQANEFGTEVIPGA 245


>ref|ZP_07110192.1| glucose-1-phosphate adenylyltransferase [Oscillatoria sp. PCC 6506]
           gi|300336618|emb|CBN55342.1| glucose-1-phosphate
           adenylyltransferase [Oscillatoria sp. PCC 6506]
          Length = 429

 Score = 38.9 bits (89), Expect(2) = 6e-06
 Identities = 24/59 (40%), Positives = 34/59 (57%)
 Frame = +2

Query: 212 LKEDYVDLFQVQGSLFNDGFSEKFSGMGIYVMNRHVMIKLLKESFPKANDLKYEVIPGA 388
           LKE  VD  ++  +      S   + MGIYV N+ V++KLLKES P+  D   E+IP +
Sbjct: 184 LKEMQVDTTKLGLTAEQAKESPYIASMGIYVFNKDVLMKLLKES-PEQTDFGKEIIPNS 241



 Score = 35.8 bits (81), Expect(2) = 6e-06
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +1

Query: 4   HRNNKADITVAVLDSVRDHNTGFGSFKLDLENRVVGFREEPE 129
           H + KADIT++VL       + FG  K D + R+V F E+P+
Sbjct: 139 HLDTKADITLSVLPMDDKRASDFGLMKTDEDGRIVSFSEKPK 180


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