BLASTX nr result

ID: Atractylodes22_contig00048268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048268
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containi...   125   5e-27
ref|XP_004172160.1| PREDICTED: pentatricopeptide repeat-containi...   124   8e-27
ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containi...   124   8e-27
emb|CBI27156.3| unnamed protein product [Vitis vinifera]              122   2e-26
ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containi...   122   2e-26

>ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Glycine max]
          Length = 576

 Score =  125 bits (313), Expect = 5e-27
 Identities = 58/77 (75%), Positives = 67/77 (87%)
 Frame = +3

Query: 3   AKNLQRDVVTWTSRLGAYSRKKQYTKCLEIFEEMITDGCYPDGGTARVLLSACSTKKQVE 182
           +K L+ DVVTWTSR+GAYS+KK Y KCLEIFEEMI DGCYPDGGTA+VLL+ACS + Q E
Sbjct: 498 SKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYPDGGTAKVLLAACSNEDQTE 557

Query: 183 QVSLVLRTMHKDMKTEL 233
           QV+ V+RTMHKDMKT L
Sbjct: 558 QVTTVIRTMHKDMKTVL 574


>ref|XP_004172160.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like, partial [Cucumis sativus]
          Length = 312

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/77 (74%), Positives = 70/77 (90%)
 Frame = +3

Query: 3   AKNLQRDVVTWTSRLGAYSRKKQYTKCLEIFEEMITDGCYPDGGTARVLLSACSTKKQVE 182
           AKNL+ DVVTWTSR+GAYSRKK Y +CLE+FE+MI  GCYPDGGTA+VLLSACS+++Q+E
Sbjct: 234 AKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIE 293

Query: 183 QVSLVLRTMHKDMKTEL 233
           QV+ V+RTMHKD+KT L
Sbjct: 294 QVTNVVRTMHKDLKTLL 310


>ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Cucumis sativus]
          Length = 576

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/77 (74%), Positives = 70/77 (90%)
 Frame = +3

Query: 3   AKNLQRDVVTWTSRLGAYSRKKQYTKCLEIFEEMITDGCYPDGGTARVLLSACSTKKQVE 182
           AKNL+ DVVTWTSR+GAYSRKK Y +CLE+FE+MI  GCYPDGGTA+VLLSACS+++Q+E
Sbjct: 498 AKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIE 557

Query: 183 QVSLVLRTMHKDMKTEL 233
           QV+ V+RTMHKD+KT L
Sbjct: 558 QVTNVVRTMHKDLKTLL 574


>emb|CBI27156.3| unnamed protein product [Vitis vinifera]
          Length = 625

 Score =  122 bits (307), Expect = 2e-26
 Identities = 55/77 (71%), Positives = 67/77 (87%)
 Frame = +3

Query: 3   AKNLQRDVVTWTSRLGAYSRKKQYTKCLEIFEEMITDGCYPDGGTARVLLSACSTKKQVE 182
           A+NL  DVVTWTSR+GAYSR+KQY +CLE+FEEMI  GCYPDGGTA+VLLSACS   Q++
Sbjct: 549 ARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQ 608

Query: 183 QVSLVLRTMHKDMKTEL 233
           +V+ V+RTMHKDM+T L
Sbjct: 609 EVTTVIRTMHKDMRTSL 625


>ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Vitis vinifera]
          Length = 587

 Score =  122 bits (307), Expect = 2e-26
 Identities = 55/77 (71%), Positives = 67/77 (87%)
 Frame = +3

Query: 3   AKNLQRDVVTWTSRLGAYSRKKQYTKCLEIFEEMITDGCYPDGGTARVLLSACSTKKQVE 182
           A+NL  DVVTWTSR+GAYSR+KQY +CLE+FEEMI  GCYPDGGTA+VLLSACS   Q++
Sbjct: 511 ARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQ 570

Query: 183 QVSLVLRTMHKDMKTEL 233
           +V+ V+RTMHKDM+T L
Sbjct: 571 EVTTVIRTMHKDMRTSL 587


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