BLASTX nr result

ID: Atractylodes22_contig00048256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048256
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_398372.1| Ycf2 [Lactuca sativa] gi|81176311|ref|YP_398388...   239   1e-61
ref|YP_001837404.1| Ycf2 [Guizotia abyssinica] gi|183217801|ref|...   238   3e-61
ref|YP_004564434.1| hypothetical chloroplast RF21 (chloroplast) ...   237   7e-61
ref|YP_004564416.1| hypothetical chloroplast RF21 (chloroplast) ...   237   7e-61
ref|YP_588161.1| Ycf2 [Helianthus annuus] gi|94502554|ref|YP_588...   237   7e-61

>ref|YP_398372.1| Ycf2 [Lactuca sativa] gi|81176311|ref|YP_398388.1| Ycf2 [Lactuca
           sativa] gi|109896301|sp|Q332R7.1|YCF2_LACSA RecName:
           Full=Protein ycf2 gi|78675213|dbj|BAE47639.1| ycf2
           protein [Lactuca sativa] gi|78675229|dbj|BAE47655.1|
           ycf2 [Lactuca sativa] gi|88657026|gb|ABD47276.1|
           hypothetical chloroplast RF2 [Lactuca sativa]
           gi|88657046|gb|ABD47296.1| hypothetical chloroplast RF2
           [Lactuca sativa]
          Length = 2264

 Score =  239 bits (611), Expect = 1e-61
 Identities = 112/114 (98%), Positives = 113/114 (99%)
 Frame = +1

Query: 1   VSIHPISSDSGCDMVPKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYTLHHDFESE 180
           VSIHPISSDSGCDMVPKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYTLHHDFESE
Sbjct: 550 VSIHPISSDSGCDMVPKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYTLHHDFESE 609

Query: 181 ERFPEMADLFTLSITEPDLVYHKRFAFSIDSYGLDPKQFLNGVFNSRYEWKTTS 342
           ERF E+ADLFTLSITEPDLVYHKRFAFSIDSYGLDPKQFLNGVFNSRYEWKTTS
Sbjct: 610 ERFQELADLFTLSITEPDLVYHKRFAFSIDSYGLDPKQFLNGVFNSRYEWKTTS 663


>ref|YP_001837404.1| Ycf2 [Guizotia abyssinica] gi|183217801|ref|YP_001837421.1| Ycf2
           [Guizotia abyssinica]
           gi|205412917|sp|B2LMN7.1|YCF2_GUIAB RecName:
           Full=Protein ycf2 gi|179366299|gb|ACB86570.1|
           hypothetical chloroplast RF21 [Guizotia abyssinica]
           gi|179366316|gb|ACB86587.1| hypothetical chloroplast
           RF21 [Guizotia abyssinica]
          Length = 2276

 Score =  238 bits (608), Expect = 3e-61
 Identities = 112/114 (98%), Positives = 112/114 (98%)
 Frame = +1

Query: 1   VSIHPISSDSGCDMVPKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYTLHHDFESE 180
           VSIHPIS DSGCDMVPKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYTLHHDFESE
Sbjct: 550 VSIHPISLDSGCDMVPKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYTLHHDFESE 609

Query: 181 ERFPEMADLFTLSITEPDLVYHKRFAFSIDSYGLDPKQFLNGVFNSRYEWKTTS 342
           ERF EMADLFTLSITEPDLVYHKRFAFSIDSYGLDPKQFLNGVFNSRYEWKTTS
Sbjct: 610 ERFQEMADLFTLSITEPDLVYHKRFAFSIDSYGLDPKQFLNGVFNSRYEWKTTS 663


>ref|YP_004564434.1| hypothetical chloroplast RF21 (chloroplast) [Ageratina adenophora]
           gi|334089736|gb|AEG64619.1| hypothetical chloroplast
           RF21 (chloroplast) [Ageratina adenophora]
          Length = 2248

 Score =  237 bits (605), Expect = 7e-61
 Identities = 111/114 (97%), Positives = 112/114 (98%)
 Frame = +1

Query: 1   VSIHPISSDSGCDMVPKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYTLHHDFESE 180
           VSIHPIS DSGCDMVPKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYTLHHDFESE
Sbjct: 550 VSIHPISLDSGCDMVPKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYTLHHDFESE 609

Query: 181 ERFPEMADLFTLSITEPDLVYHKRFAFSIDSYGLDPKQFLNGVFNSRYEWKTTS 342
           +RF EMADLFTLSITEPDLVYHKRFAFSIDSYGLDPKQFLNGVFNSRYEWKTTS
Sbjct: 610 DRFQEMADLFTLSITEPDLVYHKRFAFSIDSYGLDPKQFLNGVFNSRYEWKTTS 663


>ref|YP_004564416.1| hypothetical chloroplast RF21 (chloroplast) [Ageratina adenophora]
           gi|334089718|gb|AEG64601.1| hypothetical chloroplast
           RF21 (chloroplast) [Ageratina adenophora]
          Length = 2248

 Score =  237 bits (605), Expect = 7e-61
 Identities = 111/114 (97%), Positives = 112/114 (98%)
 Frame = +1

Query: 1   VSIHPISSDSGCDMVPKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYTLHHDFESE 180
           VSIHPIS DSGCDMVPKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYTLHHDFESE
Sbjct: 550 VSIHPISLDSGCDMVPKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYTLHHDFESE 609

Query: 181 ERFPEMADLFTLSITEPDLVYHKRFAFSIDSYGLDPKQFLNGVFNSRYEWKTTS 342
           +RF EMADLFTLSITEPDLVYHKRFAFSIDSYGLDPKQFLNGVFNSRYEWKTTS
Sbjct: 610 DRFQEMADLFTLSITEPDLVYHKRFAFSIDSYGLDPKQFLNGVFNSRYEWKTTS 663


>ref|YP_588161.1| Ycf2 [Helianthus annuus] gi|94502554|ref|YP_588180.1| Ycf2
           [Helianthus annuus] gi|109896300|sp|Q1KXP6.1|YCF2_HELAN
           RecName: Full=Protein ycf2 gi|88656938|gb|ABD47189.1|
           hypothetical chloroplast RF2 [Helianthus annuus]
           gi|88656958|gb|ABD47209.1| hypothetical chloroplast RF2
           [Helianthus annuus]
          Length = 2131

 Score =  237 bits (605), Expect = 7e-61
 Identities = 111/114 (97%), Positives = 112/114 (98%)
 Frame = +1

Query: 1   VSIHPISSDSGCDMVPKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYTLHHDFESE 180
           VSIHPIS DSGCDMVPKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYTLHHDFESE
Sbjct: 398 VSIHPISLDSGCDMVPKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYTLHHDFESE 457

Query: 181 ERFPEMADLFTLSITEPDLVYHKRFAFSIDSYGLDPKQFLNGVFNSRYEWKTTS 342
           +RF EMADLFTLSITEPDLVYHKRFAFSIDSYGLDPKQFLNGVFNSRYEWKTTS
Sbjct: 458 DRFQEMADLFTLSITEPDLVYHKRFAFSIDSYGLDPKQFLNGVFNSRYEWKTTS 511


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