BLASTX nr result
ID: Atractylodes22_contig00048222
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00048222 (283 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002525329.1| Transmembrane protein, putative [Ricinus com... 51 1e-06 ref|XP_002320480.1| predicted protein [Populus trichocarpa] gi|2... 54 1e-06 >ref|XP_002525329.1| Transmembrane protein, putative [Ricinus communis] gi|223535388|gb|EEF37062.1| Transmembrane protein, putative [Ricinus communis] Length = 425 Score = 50.8 bits (120), Expect(2) = 1e-06 Identities = 27/67 (40%), Positives = 35/67 (52%) Frame = +2 Query: 5 SFFGVMFILRSMSSMQGRSGKVGDHRDSAVHGIHHVYVVXXXXXXXXXXXXXFCLIRAGA 184 SFFGV+FI R + Q G+ +++ G HHVY V +C I+AGA Sbjct: 223 SFFGVLFIYRQILRTQA-----GEANNTSASGSHHVYAVLAGLLSLITGGISYCFIKAGA 277 Query: 185 KPSDQPV 205 K SDQPV Sbjct: 278 KASDQPV 284 Score = 26.6 bits (57), Expect(2) = 1e-06 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = +3 Query: 246 TIFSFGLLSSPA 281 T+FSFGLLSSPA Sbjct: 286 TVFSFGLLSSPA 297 >ref|XP_002320480.1| predicted protein [Populus trichocarpa] gi|222861253|gb|EEE98795.1| predicted protein [Populus trichocarpa] Length = 393 Score = 53.5 bits (127), Expect(2) = 1e-06 Identities = 27/68 (39%), Positives = 39/68 (57%) Frame = +2 Query: 5 SFFGVMFILRSMSSMQGRSGKVGDHRDSAVHGIHHVYVVXXXXXXXXXXXXXFCLIRAGA 184 SFFGV+FI R + + QG +VG+ A+ G +HV V +CL++AGA Sbjct: 215 SFFGVLFIFRQILTTQGALLRVGETNYIAIMGRNHVLTVLVALFSSITGGISYCLVKAGA 274 Query: 185 KPSDQPVS 208 K SDQP++ Sbjct: 275 KASDQPLA 282 Score = 23.5 bits (49), Expect(2) = 1e-06 Identities = 8/12 (66%), Positives = 12/12 (100%) Frame = +3 Query: 246 TIFSFGLLSSPA 281 T+FSFG+L++PA Sbjct: 283 TVFSFGILATPA 294