BLASTX nr result

ID: Atractylodes22_contig00048222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048222
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525329.1| Transmembrane protein, putative [Ricinus com...    51   1e-06
ref|XP_002320480.1| predicted protein [Populus trichocarpa] gi|2...    54   1e-06

>ref|XP_002525329.1| Transmembrane protein, putative [Ricinus communis]
           gi|223535388|gb|EEF37062.1| Transmembrane protein,
           putative [Ricinus communis]
          Length = 425

 Score = 50.8 bits (120), Expect(2) = 1e-06
 Identities = 27/67 (40%), Positives = 35/67 (52%)
 Frame = +2

Query: 5   SFFGVMFILRSMSSMQGRSGKVGDHRDSAVHGIHHVYVVXXXXXXXXXXXXXFCLIRAGA 184
           SFFGV+FI R +   Q      G+  +++  G HHVY V             +C I+AGA
Sbjct: 223 SFFGVLFIYRQILRTQA-----GEANNTSASGSHHVYAVLAGLLSLITGGISYCFIKAGA 277

Query: 185 KPSDQPV 205
           K SDQPV
Sbjct: 278 KASDQPV 284



 Score = 26.6 bits (57), Expect(2) = 1e-06
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +3

Query: 246 TIFSFGLLSSPA 281
           T+FSFGLLSSPA
Sbjct: 286 TVFSFGLLSSPA 297


>ref|XP_002320480.1| predicted protein [Populus trichocarpa] gi|222861253|gb|EEE98795.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 53.5 bits (127), Expect(2) = 1e-06
 Identities = 27/68 (39%), Positives = 39/68 (57%)
 Frame = +2

Query: 5   SFFGVMFILRSMSSMQGRSGKVGDHRDSAVHGIHHVYVVXXXXXXXXXXXXXFCLIRAGA 184
           SFFGV+FI R + + QG   +VG+    A+ G +HV  V             +CL++AGA
Sbjct: 215 SFFGVLFIFRQILTTQGALLRVGETNYIAIMGRNHVLTVLVALFSSITGGISYCLVKAGA 274

Query: 185 KPSDQPVS 208
           K SDQP++
Sbjct: 275 KASDQPLA 282



 Score = 23.5 bits (49), Expect(2) = 1e-06
 Identities = 8/12 (66%), Positives = 12/12 (100%)
 Frame = +3

Query: 246 TIFSFGLLSSPA 281
           T+FSFG+L++PA
Sbjct: 283 TVFSFGILATPA 294


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