BLASTX nr result

ID: Atractylodes22_contig00048167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048167
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa Japonica Group] gi...    59   4e-07
ref|XP_003535019.1| PREDICTED: uncharacterized protein LOC100795...    59   5e-07
ref|XP_003614072.1| hypothetical protein MTR_5g044430 [Medicago ...    55   6e-06
gb|ABN07997.1| contains similarity to reverse trancriptase , rel...    55   8e-06

>emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa Japonica Group]
            gi|38346911|emb|CAE03883.2| OSJNBb0015N08.11 [Oryza
            sativa Japonica Group]
          Length = 1026

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/99 (30%), Positives = 51/99 (51%)
 Frame = +3

Query: 15   WLLAEDGRFLVGNLRDMIDRRILSSGSQARETLWCSAIPLKVNVIMWRFRRGRIQVRDAF 194
            W L++DG+F V   R       L   S   + +W   +PLK+ + +W F + +I  +D  
Sbjct: 815  WTLSKDGKFTV---RSFYRALKLQQTSFPNKKIWKFRVPLKIRIFIWFFTKNKILTKDNL 871

Query: 195  DKRGIDMHSVLCPRCESEVESAEQCFF*CPLSKQVWDCL 311
             KRG       C  C+ +VE+ +  FF CPL++ +W+ +
Sbjct: 872  LKRGWRKGDNKCQFCD-KVETVQHLFFDCPLARLIWNII 909


>ref|XP_003535019.1| PREDICTED: uncharacterized protein LOC100795609 [Glycine max]
          Length = 525

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
 Frame = +3

Query: 9   WVWLLAEDGRFLVGNLRDMIDRRIL-SSGSQARETLWCSAIPLKVNVIMWRFRRGRIQVR 185
           W W    +G++   +  D+I      SS  +  E LW   +P +  V  WR  R R+  R
Sbjct: 319 WEWSANPEGQYSTRSAYDLIGEEATDSSQEECFEKLWRIKVPARFLVFAWRLLRDRLPTR 378

Query: 186 DAFDKRGIDMHSVLCPRCESEVESAEQCFF*CPLSKQVW 302
               +R I +   LCP C ++ E A   FF C   + +W
Sbjct: 379 KNLQRRQIQLTDSLCPLCRTQQEDASHLFFHCSKVQPIW 417


>ref|XP_003614072.1| hypothetical protein MTR_5g044430 [Medicago truncatula]
           gi|355515407|gb|AES97030.1| hypothetical protein
           MTR_5g044430 [Medicago truncatula]
          Length = 324

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
 Frame = +3

Query: 9   WVWLLAEDGRFLVGNLRDMIDRRILSSGSQARETLWCSAIPLKVNVIMWRFRRGRIQVRD 188
           WVWL    G F V    +++   +  +   A + +W   +PLK++++ WR  R R+  R 
Sbjct: 121 WVWLPDHIGGFTVRGAYEVLTATVNPNRDSALDLVWHHQVPLKISILAWRLIRDRLPTRA 180

Query: 189 AFDKRGI-DMHSVLCPRCESEVESAEQCFF*CPLSKQVWD 305
               RGI  + + LC      +E+A+  F  CP    +W+
Sbjct: 181 NLAARGILQLDTALCVAGCGMIETADHLFLSCPPFVVLWE 220


>gb|ABN07997.1| contains similarity to reverse trancriptase , related [Medicago
           truncatula]
          Length = 407

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
 Frame = +3

Query: 54  LRDMIDRRILSSGSQARETL-----WCSAIPLKVNVIMWRFRRGRIQVRDAFDKRGIDMH 218
           LR    ++I ++ + + ETL     W      +  V++WR     + VR +  KRGI  +
Sbjct: 302 LRTWQTQQINNTSTSSDETLIWKKIWSLHTIPRHKVLLWRILNDSLPVRSSLRKRGIQCY 361

Query: 219 SVLCPRCESEVESAEQCFF*CPLSKQVW 302
             LCPRC S+ E+    F  CPLSK+VW
Sbjct: 362 P-LCPRCHSKTETITHLFMSCPLSKRVW 388


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