BLASTX nr result

ID: Atractylodes22_contig00048156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048156
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA22288.1| polyprotein [Oryza australiensis]                      46   2e-10
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]         58   7e-07

>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score = 46.2 bits (108), Expect(2) = 2e-10
 Identities = 22/39 (56%), Positives = 32/39 (82%)
 Frame = -1

Query: 355  RKLFVLSQRTYINKVLKWFSIYENKNGFLYMSYDISLSK 239
            ++L  LSQ TYI+KVLK F+++++K GFL MS+ I+LSK
Sbjct: 1038 KRLIGLSQSTYIDKVLKRFNMHDSKKGFLPMSHGINLSK 1076



 Score = 43.5 bits (101), Expect(2) = 2e-10
 Identities = 19/38 (50%), Positives = 27/38 (71%)
 Frame = -2

Query: 180  HAMICVGLNVSHVLSMISRYQFNPGE*NWIIIKTILKH 67
            +AM+C   +VS+ LS  SRYQ +PGE +W  +K ILK+
Sbjct: 1103 YAMLCTRPDVSYALSATSRYQSDPGEGHWTAVKNILKY 1140


>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
          Length = 948

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 16/134 (11%)
 Frame = -1

Query: 355  RKLFVLSQRTYINKVLKWFSIYENKNGFLYMSYDISLSK-------ETRLKMLV-----K 212
            ++L  LSQ TYI+KVLK F++ ++K GFL MS+DI+L K       + R KM V      
Sbjct: 760  KRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHDINLGKNQCPQTTDERNKMSVIPYASA 819

Query: 211  CENMFRQLDLSCHDMCWT*CLACFEHDK*IPI*SW*MK----LDYHQDYPKAFLIYSGKE 44
              ++   +  +C D+ +   L+     +  P  S  +     L Y +     FL+Y G+E
Sbjct: 820  IGSIMYAMLCTCPDVSY--ALSATNRYQSDPGESHWIAVKNILKYLRRTEDMFLVYGGQE 877

Query: 43   ELSVKCYTDASFKT 2
            EL V  YTDASF+T
Sbjct: 878  ELVVNGYTDASFQT 891


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