BLASTX nr result

ID: Atractylodes22_contig00048042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048042
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   134   6e-30
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   108   6e-22
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   108   6e-22
ref|XP_004140366.1| PREDICTED: uncharacterized protein LOC101210...   107   1e-21
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...   104   9e-21

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  134 bits (338), Expect = 6e-30
 Identities = 60/121 (49%), Positives = 81/121 (66%)
 Frame = +1

Query: 13   QWLDRASLLDGFDSDPQLQKIVTDLTANPRSHPGFSLHKDKLYYNGRLIIPATSQWIPKL 192
            QW D   L +    D QLQKI+ DL  +  S PG+ L +  L Y GRL++ + S  IP L
Sbjct: 806  QWKDEKLLREELSRDSQLQKIIGDLQRDASSRPGYMLKQGVLLYEGRLVVSSKSVMIPTL 865

Query: 193  ITDFHCSPSGGHSGFYRTYKRMALHIYWVGMTKTAKAFVQACNTCQRYKSSTLAPGGLLQ 372
            + +FH +P GGHSGFYRTY+R+A ++YWVGM  T + +V++C+TCQR K    +PGGLLQ
Sbjct: 866  LAEFHSTPQGGHSGFYRTYRRLAANVYWVGMKNTVQEYVRSCDTCQRQKYLASSPGGLLQ 925

Query: 373  P 375
            P
Sbjct: 926  P 926


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/107 (46%), Positives = 67/107 (62%)
 Frame = +1

Query: 55   DPQLQKIVTDLTANPRSHPGFSLHKDKLYYNGRLIIPATSQWIPKLITDFHCSPSGGHSG 234
            D  LQ ++ ++TA      GF++    L YNGRL+IP        L+ ++H SP GGHSG
Sbjct: 1061 DADLQHLMAEVTAGRTPLQGFTVEHGLLKYNGRLVIPKNVPLTTTLLEEYHSSPMGGHSG 1120

Query: 235  FYRTYKRMALHIYWVGMTKTAKAFVQACNTCQRYKSSTLAPGGLLQP 375
             ++TYKR+A   YW GM K    FVQ C  CQ++K+STL+P GLLQP
Sbjct: 1121 IFKTYKRLAGEWYWKGMKKDVTTFVQNCQICQQFKTSTLSPAGLLQP 1167


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/122 (42%), Positives = 71/122 (58%)
 Frame = +1

Query: 10   PQWLDRASLLDGFDSDPQLQKIVTDLTANPRSHPGFSLHKDKLYYNGRLIIPATSQWIPK 189
            P  +D   +    ++DP L KI   L  +P ++P +SL    L Y GRL++P  S  +P 
Sbjct: 1661 PSRIDTXLISSQVEADPHLXKIKQRLLXDPDAYPRYSLDHGILLYKGRLVLPKASPLVPA 1720

Query: 190  LITDFHCSPSGGHSGFYRTYKRMALHIYWVGMTKTAKAFVQACNTCQRYKSSTLAPGGLL 369
            L+ + H S  GGHSGF  TYKR+    +WVGM    K FV+ C  CQ+ K+ TL+P GLL
Sbjct: 1721 LLQEGHASVVGGHSGFLXTYKRLTRDFFWVGMKNDIKEFVEKCLVCQQNKTLTLSPAGLL 1780

Query: 370  QP 375
            QP
Sbjct: 1781 QP 1782


>ref|XP_004140366.1| PREDICTED: uncharacterized protein LOC101210176 [Cucumis sativus]
          Length = 1740

 Score =  107 bits (267), Expect = 1e-21
 Identities = 54/119 (45%), Positives = 68/119 (57%)
 Frame = +1

Query: 19  LDRASLLDGFDSDPQLQKIVTDLTANPRSHPGFSLHKDKLYYNGRLIIPATSQWIPKLIT 198
           LD   +++    D +LQ I+  L  NP     +    DKL Y GRL++  TS  IP L+ 
Sbjct: 254 LDVEMVMEEVKRDEELQGIIEVLKENPEGKANYQWVSDKLLYKGRLVLSKTSSLIPTLLH 313

Query: 199 DFHCSPSGGHSGFYRTYKRMALHIYWVGMTKTAKAFVQACNTCQRYKSSTLAPGGLLQP 375
            FH S  GGHSGF RTYK M   I+WVGM    K +V+ C TCQR K+  L+  GLLQP
Sbjct: 314 TFHNSVLGGHSGFLRTYKHMNGEIHWVGMKNDVKKYVEQCETCQRNKTKALSRAGLLQP 372



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/83 (46%), Positives = 49/83 (59%)
 Frame = +1

Query: 127 KDKLYYNGRLIIPATSQWIPKLITDFHCSPSGGHSGFYRTYKRMALHIYWVGMTKTAKAF 306
           K K  Y  R+++  TS  IPK++  FH S  GGHSGF RTYKRM+  +YW GM    K +
Sbjct: 712 KGKCLY--RMVVSQTSTLIPKILHTFHDSILGGHSGFLRTYKRMSGELYWRGMKAEVKKY 769

Query: 307 VQACNTCQRYKSSTLAPGGLLQP 375
           V+ C  C R K     P G+LQP
Sbjct: 770 VEQCEICHRNKYEATKPAGVLQP 792


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score =  104 bits (259), Expect = 9e-21
 Identities = 50/125 (40%), Positives = 72/125 (57%)
 Frame = +1

Query: 1    VSYPQWLDRASLLDGFDSDPQLQKIVTDLTANPRSHPGFSLHKDKLYYNGRLIIPATSQW 180
            ++ P  LD   +      D +L+ I   L  +P S P +S+ + +L+Y GRL++P TS  
Sbjct: 803  IAVPSILDVKVVEKEVQEDDKLKDIFEQLLKDPDSIPRYSIKQGRLFYKGRLVLPKTSSL 862

Query: 181  IPKLITDFHCSPSGGHSGFYRTYKRMALHIYWVGMTKTAKAFVQACNTCQRYKSSTLAPG 360
            +P ++  FH    GGHSG  RTYKR+A  +YW GM    K +V  C  CQ+ K+  L+P 
Sbjct: 863  LPTILHTFHDLVVGGHSGQLRTYKRIAAELYWEGMKNDIKIYVDQCPVCQQNKTQALSPA 922

Query: 361  GLLQP 375
            GLLQP
Sbjct: 923  GLLQP 927


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