BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047986
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]               76   1e-34
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                   78   5e-34
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]               73   3e-33
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]               72   3e-33
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...    73   2e-30

>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 75.9 bits (185), Expect(3) = 1e-34
 Identities = 40/86 (46%), Positives = 53/86 (61%)
 Frame = +1

Query: 142 FKH*LALVENQTGRRLKVLRLDNDGSYMSVNFCSFCKDKRIHRNFITPHDPQSN*VAKCM 321
           FK   A +E +TG+++K LR DN G Y+   F +FCK + I R F   H PQ N VA+ M
Sbjct: 529 FKAFKAQIELETGKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERM 588

Query: 322 NRTLLEKERYMRIFVGFSKTFLAGAL 399
           NRTLLE+ R M    G +K+F A A+
Sbjct: 589 NRTLLERTRAMLKTAGMAKSFWAEAV 614



 Score = 72.4 bits (176), Expect(3) = 1e-34
 Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
 Frame = +3

Query: 375 KDLFGWSVVTAVHIINRLPFSAINGKIPEEVW*DNKSVRLYYLRIFGYRVFIHIT*KD-- 548
           K  +  +V TA ++INR P +AI+ K P E+W   K V    L +FG  V++    ++  
Sbjct: 607 KSFWAEAVKTACYVINRSPSTAIDLKTPMEMW-KGKPVDYSSLHVFGCPVYVMYNSQERT 665

Query: 549 KLDPHAIQGQLLGYTNDVKGYRFWNPKIRKVIHSRNMTSDEAFTMKLQDIPTSRKEKATK 728
           KLDP + +   LGY ++VKGYR W+P  RKV+ SR++   E      Q   ++ KE A  
Sbjct: 666 KLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSKQKNDSTSKETAIV 725

Query: 729 TVE 737
            +E
Sbjct: 726 QME 728



 Score = 45.4 bits (106), Expect(3) = 1e-34
 Identities = 21/47 (44%), Positives = 32/47 (68%)
 Frame = +3

Query: 3   DYVHTNV*EPGGTQSYGRGRYFVSFIDDYSHNVWMFIMKQRFEVFEI 143
           D +H++V E     S G  RYFVSFIDDYS  +W++ +K++ +VF +
Sbjct: 483 DLIHSDVWE-SPELSLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPV 528


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score = 77.8 bits (190), Expect(3) = 5e-34
 Identities = 42/85 (49%), Positives = 52/85 (61%)
 Frame = +1

Query: 142 FKH*LALVENQTGRRLKVLRLDNDGSYMSVNFCSFCKDKRIHRNFITPHDPQSN*VAKCM 321
           FK   A VE +TG+R+K LR DN G Y   +F +FCK + I R F   H PQ N VA+ M
Sbjct: 529 FKEFKAQVELETGKRIKCLRTDNGGEYTDGDFLAFCKQEGITRQFTVAHTPQQNGVAERM 588

Query: 322 NRTLLEKERYMRIFVGFSKTFLAGA 396
           NRTLLE+ R M    G +K+F A A
Sbjct: 589 NRTLLERTRAMLKTAGLAKSFWAEA 613



 Score = 71.6 bits (174), Expect(3) = 5e-34
 Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
 Frame = +3

Query: 375 KDLFGWSVVTAVHIINRLPFSAINGKIPEEVW*DNKSVRLYYLRIFGYRVFIHIT*KD-- 548
           K  +  +  TA ++INR P +AI  K P E+W   K      LR+FG  V++    ++  
Sbjct: 607 KSFWAEAAKTACYVINRSPSTAIGLKTPMEMW-KGKPGDYSSLRVFGCPVYVMYNSQERT 665

Query: 549 KLDPHAIQGQLLGYTNDVKGYRFWNPKIRKVIHSRNMTSDEAFTMKLQDIPTSRKEKATK 728
           KLDP + +   LGY ++VKGYR W+P  RK+  SR++   E    K Q    + KE AT 
Sbjct: 666 KLDPKSRRCTFLGYADNVKGYRLWDPTARKIFVSRDVIFVENELQKEQKNDGTTKETATV 725

Query: 729 TVE 737
            +E
Sbjct: 726 EIE 728



 Score = 42.0 bits (97), Expect(3) = 5e-34
 Identities = 19/47 (40%), Positives = 31/47 (65%)
 Frame = +3

Query: 3   DYVHTNV*EPGGTQSYGRGRYFVSFIDDYSHNVWMFIMKQRFEVFEI 143
           D +H++V E     S G  +YFVSFIDDYS  +W++ +K++  V+ +
Sbjct: 483 DLIHSDVWESPEV-SIGGAKYFVSFIDDYSRRLWVYPIKKKSGVYSV 528


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 72.8 bits (177), Expect(3) = 3e-33
 Identities = 39/86 (45%), Positives = 52/86 (60%)
 Frame = +1

Query: 142 FKH*LALVENQTGRRLKVLRLDNDGSYMSVNFCSFCKDKRIHRNFITPHDPQSN*VAKCM 321
           FK   A +E +TG+++K LR DN G Y+   F +FCK + I R F   H PQ N VA+ M
Sbjct: 529 FKAFKAQIELETGKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERM 588

Query: 322 NRTLLEKERYMRIFVGFSKTFLAGAL 399
           NRTLLE+ R M      +K+F A A+
Sbjct: 589 NRTLLERTRAMLKTAEMAKSFWAEAV 614



 Score = 70.5 bits (171), Expect(3) = 3e-33
 Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
 Frame = +3

Query: 375 KDLFGWSVVTAVHIINRLPFSAINGKIPEEVW*DNKSVRLYYLRIFGYRVFIHIT*KD-- 548
           K  +  +V TA ++INR P + I+ K P E+W   K V    L +FG  V++    ++  
Sbjct: 607 KSFWAEAVKTACYVINRSPSTTIDLKTPMEMW-KGKPVDYSSLHVFGCPVYVMYNSQERT 665

Query: 549 KLDPHAIQGQLLGYTNDVKGYRFWNPKIRKVIHSRNMTSDEAFTMKLQDIPTSRKEKATK 728
           KLDP + +   LGY ++VKGYR W+P  RKV+ SR++   E      Q   ++ KE A  
Sbjct: 666 KLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSEQKNDSTFKETAIL 725

Query: 729 TVE 737
            +E
Sbjct: 726 QIE 728



 Score = 45.4 bits (106), Expect(3) = 3e-33
 Identities = 21/47 (44%), Positives = 32/47 (68%)
 Frame = +3

Query: 3   DYVHTNV*EPGGTQSYGRGRYFVSFIDDYSHNVWMFIMKQRFEVFEI 143
           D +H++V E     S G  RYFVSFIDDYS  +W++ +K++ +VF +
Sbjct: 483 DLIHSDVWE-SPKLSLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPV 528


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 72.4 bits (176), Expect(3) = 3e-33
 Identities = 39/85 (45%), Positives = 51/85 (60%)
 Frame = +1

Query: 142 FKH*LALVENQTGRRLKVLRLDNDGSYMSVNFCSFCKDKRIHRNFITPHDPQSN*VAKCM 321
           FK   A +E +T +++K LR DN G Y+   F +FCK + I R F   H PQ N VA+ M
Sbjct: 529 FKAFKAQIELETEKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERM 588

Query: 322 NRTLLEKERYMRIFVGFSKTFLAGA 396
           NRTLLE+ R M    G +K+F A A
Sbjct: 589 NRTLLERTRAMLKTAGMAKSFWAEA 613



 Score = 71.2 bits (173), Expect(3) = 3e-33
 Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
 Frame = +3

Query: 375 KDLFGWSVVTAVHIINRLPFSAINGKIPEEVW*DNKSVRLYYLRIFGYRVFI--HIT*KD 548
           K  +  +  TA ++INR P +AI+ K P E+W   K V    L +FG  V++  +   K 
Sbjct: 607 KSFWAEAAKTACYVINRSPSTAIDLKTPMEMW-KGKPVDYSSLHVFGCPVYVMYNSQEKT 665

Query: 549 KLDPHAIQGQLLGYTNDVKGYRFWNPKIRKVIHSRNMTSDEAFTMKLQDIPTSRKEKATK 728
           KLDP + +   LGY ++VKGYR W+P  RKV+ SR++   E      Q   ++ KE A  
Sbjct: 666 KLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSEQKNDSTSKETAIV 725

Query: 729 TVE 737
            +E
Sbjct: 726 QME 728



 Score = 45.1 bits (105), Expect(3) = 3e-33
 Identities = 21/47 (44%), Positives = 32/47 (68%)
 Frame = +3

Query: 3   DYVHTNV*EPGGTQSYGRGRYFVSFIDDYSHNVWMFIMKQRFEVFEI 143
           D +H++V E     S G  RYFVSFIDDYS  +W++ +K++ +VF +
Sbjct: 483 DLIHSDVWESPEI-SLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPV 528


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score = 73.2 bits (178), Expect(3) = 2e-30
 Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 2/105 (1%)
 Frame = +3

Query: 363 RRFFKDLFGWSVVTAVHIINRLPFSAINGKIPEEVW*DNKSVRLYYLRIFGYRVFIHIT* 542
           +R  K+L+  +V  AV+++NR P  +++GK P+E W   KS  + +LR+FG     H+  
Sbjct: 649 KRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKS-GVSHLRVFGSIAHAHVPD 707

Query: 543 --KDKLDPHAIQGQLLGYTNDVKGYRFWNPKIRKVIHSRNMTSDE 671
             + KLD  + +   +GY N+ KGY+ +NP  +K I SRN+  DE
Sbjct: 708 EKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 752



 Score = 56.2 bits (134), Expect(3) = 2e-30
 Identities = 29/71 (40%), Positives = 38/71 (53%)
 Frame = +1

Query: 142 FKH*LALVENQTGRRLKVLRLDNDGSYMSVNFCSFCKDKRIHRNFITPHDPQSN*VAKCM 321
           FK   A VE ++G  +K +R D  G + S  F  +C+D  I R    P  PQ N VA+  
Sbjct: 575 FKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERK 634

Query: 322 NRTLLEKERYM 354
           NRT+LE  R M
Sbjct: 635 NRTILEMARSM 645



 Score = 49.7 bits (117), Expect(3) = 2e-30
 Identities = 20/47 (42%), Positives = 32/47 (68%)
 Frame = +3

Query: 3   DYVHTNV*EPGGTQSYGRGRYFVSFIDDYSHNVWMFIMKQRFEVFEI 143
           + +HT+V  P   +S G+  YF+ FIDD+S   W++ +K++ EVFEI
Sbjct: 528 ELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEI 574