BLASTX nr result

ID: Atractylodes22_contig00047961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047961
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containi...   149   3e-34
ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   140   8e-32
ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containi...   140   8e-32
ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containi...   135   4e-30
ref|XP_002298671.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30

>ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  149 bits (375), Expect = 3e-34
 Identities = 70/93 (75%), Positives = 84/93 (90%)
 Frame = +1

Query: 4   SWTALISGLIQSGHWVSAFHLFIAMRKEGIKIIDPFILSSVIGASANLAALELGKQVHCL 183
           SWTALISGL+QSG+WV +F+LF+ MR +GI I+DPFILSS+IGASANLA L LGKQ+HCL
Sbjct: 204 SWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCL 263

Query: 184 VLGLGFESSLYVSNALVDMYAKCSDIIAAKTAF 282
           V+ LG+ESSL+VSNALVDMYAKCSD++AAK  F
Sbjct: 264 VILLGYESSLFVSNALVDMYAKCSDVLAAKKIF 296


>ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14050, mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/95 (71%), Positives = 80/95 (84%)
 Frame = +1

Query: 1   FSWTALISGLIQSGHWVSAFHLFIAMRKEGIKIIDPFILSSVIGASANLAALELGKQVHC 180
           FSWTALISGLIQSGH + +F LF  MR+EGI I+DP +LSSV+G  ANLA LELGKQ+H 
Sbjct: 203 FSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHG 262

Query: 181 LVLGLGFESSLYVSNALVDMYAKCSDIIAAKTAFH 285
           LV+ LGFES L++SNALVDMYAKCSDI+AAK  F+
Sbjct: 263 LVIALGFESCLFISNALVDMYAKCSDILAAKDIFY 297


>ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/95 (71%), Positives = 80/95 (84%)
 Frame = +1

Query: 1   FSWTALISGLIQSGHWVSAFHLFIAMRKEGIKIIDPFILSSVIGASANLAALELGKQVHC 180
           FSWTALISGLIQSGH + +F LF  MR+EGI I+DP +LSSV+G  ANLA LELGKQ+H 
Sbjct: 203 FSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHG 262

Query: 181 LVLGLGFESSLYVSNALVDMYAKCSDIIAAKTAFH 285
           LV+ LGFES L++SNALVDMYAKCSDI+AAK  F+
Sbjct: 263 LVIALGFESCLFISNALVDMYAKCSDILAAKDIFY 297


>ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Glycine max]
          Length = 611

 Score =  135 bits (340), Expect = 4e-30
 Identities = 63/94 (67%), Positives = 79/94 (84%)
 Frame = +1

Query: 1   FSWTALISGLIQSGHWVSAFHLFIAMRKEGIKIIDPFILSSVIGASANLAALELGKQVHC 180
           F+WTALISGL+QSG+ V AFHLF+ MR EGI + DP +LSSV+GA ANLA  ELGKQ+H 
Sbjct: 204 FAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHG 263

Query: 181 LVLGLGFESSLYVSNALVDMYAKCSDIIAAKTAF 282
           +V+ LG+ES L++SNAL+DMYAKCSD++AAK  F
Sbjct: 264 VVITLGYESCLFISNALIDMYAKCSDLVAAKYIF 297


>ref|XP_002298671.1| predicted protein [Populus trichocarpa] gi|222845929|gb|EEE83476.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score =  134 bits (337), Expect = 8e-30
 Identities = 61/95 (64%), Positives = 80/95 (84%)
 Frame = +1

Query: 1   FSWTALISGLIQSGHWVSAFHLFIAMRKEGIKIIDPFILSSVIGASANLAALELGKQVHC 180
           +SWTALISGL+QSG+ +   ++FI MR+EG+ I+DP +LSSV+GA ANLA L LGKQ+H 
Sbjct: 202 YSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHG 261

Query: 181 LVLGLGFESSLYVSNALVDMYAKCSDIIAAKTAFH 285
           LV+G G+ES L++SNALVDMYAKCSDI+AA+  F+
Sbjct: 262 LVIGSGYESCLFISNALVDMYAKCSDILAARNVFN 296


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