BLASTX nr result

ID: Atractylodes22_contig00047960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047960
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297821.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
ref|XP_002518130.1| conserved hypothetical protein [Ricinus comm...    76   3e-12
dbj|BAC83624.1| unknown protein [Oryza sativa Japonica Group] gi...    55   8e-06

>ref|XP_002297821.1| predicted protein [Populus trichocarpa] gi|222845079|gb|EEE82626.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 49/96 (51%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
 Frame = +3

Query: 186 INDREANINGDRSGSRNNMNGGIEMLPTPTPLKSNLKKST--IVHEEANQLITGIRKVSW 359
           + D + +  G    SR         L   +PLKS LKK+T  IV E   +     RKVSW
Sbjct: 10  VQDHQMSNGGRNIRSRTASGSNNGPLLETSPLKSTLKKTTNAIVGENQARKDHQKRKVSW 69

Query: 360 PD-AYGKDIAHIQEFEPSVSDDGELEGVRNSCVCVI 464
           PD A+G DIAH+ EFE S SDDGELEGVRNSCVC I
Sbjct: 70  PDIAHGTDIAHVLEFESSTSDDGELEGVRNSCVCTI 105


>ref|XP_002518130.1| conserved hypothetical protein [Ricinus communis]
           gi|223542726|gb|EEF44263.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 202

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 46/78 (58%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
 Frame = +3

Query: 210 NGDRSGSRNNMNGGIEMLPTPTPLKSNLKKSTI-VHEEANQLITGI-RKVSWPDAYGKDI 383
           NG  SGS N  +  IE   T   LKSNLK++T  V EE NQ      RKVSWPDA+GKDI
Sbjct: 94  NGASSGSNNGPHI-IEPFTTAATLKSNLKRTTTAVLEENNQSRKAEKRKVSWPDAHGKDI 152

Query: 384 AHIQEFEPSVSDDGELEG 437
           AH+ EFEPS+S+ GELEG
Sbjct: 153 AHVHEFEPSISEYGELEG 170


>dbj|BAC83624.1| unknown protein [Oryza sativa Japonica Group]
           gi|125557394|gb|EAZ02930.1| hypothetical protein
           OsI_25070 [Oryza sativa Indica Group]
           gi|125599277|gb|EAZ38853.1| hypothetical protein
           OsJ_23270 [Oryza sativa Japonica Group]
          Length = 147

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/88 (38%), Positives = 49/88 (55%)
 Frame = +3

Query: 201 ANINGDRSGSRNNMNGGIEMLPTPTPLKSNLKKSTIVHEEANQLITGIRKVSWPDAYGKD 380
           AN + D  G      G  E++ T  P KS+LKK+    E++  ++ G   V W D  GKD
Sbjct: 65  ANKDHDDDGDGGGDEGSKEVVVTVVP-KSSLKKTNC--EDSKNVVKG--NVKWMDLLGKD 119

Query: 381 IAHIQEFEPSVSDDGELEGVRNSCVCVI 464
           +  ++EFEPS S D + E   N+C+CVI
Sbjct: 120 LTQVKEFEPSESGDSDDED-GNTCICVI 146


Top