BLASTX nr result

ID: Atractylodes22_contig00047958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047958
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267181.1| PREDICTED: DNA polymerase epsilon subunit 2-...   103   1e-20
emb|CBI15355.3| unnamed protein product [Vitis vinifera]              103   1e-20
emb|CAN73546.1| hypothetical protein VITISV_038180 [Vitis vinifera]   103   1e-20
ref|XP_002318325.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|XP_003574603.1| PREDICTED: DNA polymerase epsilon subunit 2-...    96   4e-18

>ref|XP_002267181.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Vitis vinifera]
          Length = 527

 Score =  103 bits (257), Expect = 1e-20
 Identities = 56/93 (60%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
 Frame = -1

Query: 280 LDELQYQSLKSSILDKEPVQRVVSLLSKAESAAEDDLXXXXXXXXS-VIDAFLIPKFRYD 104
           LDEL+ +SLKSSILDKE V RVVSLL +AE+A E+            ++DAFL+ KF YD
Sbjct: 47  LDELENESLKSSILDKESVHRVVSLLLEAEAAVEETPGAISTRSALRIVDAFLMSKFCYD 106

Query: 103 PVRKMFCEHTGRLPIHGDAPAKAWLYRDRFLLL 5
           P++K+F E+TGRL IHGDA AK+ LYR+RFLLL
Sbjct: 107 PIKKIFYENTGRLAIHGDASAKSALYRNRFLLL 139


>emb|CBI15355.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score =  103 bits (257), Expect = 1e-20
 Identities = 56/93 (60%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
 Frame = -1

Query: 280 LDELQYQSLKSSILDKEPVQRVVSLLSKAESAAEDDLXXXXXXXXS-VIDAFLIPKFRYD 104
           LDEL+ +SLKSSILDKE V RVVSLL +AE+A E+            ++DAFL+ KF YD
Sbjct: 47  LDELENESLKSSILDKESVHRVVSLLLEAEAAVEETPGAISTRSALRIVDAFLMSKFCYD 106

Query: 103 PVRKMFCEHTGRLPIHGDAPAKAWLYRDRFLLL 5
           P++K+F E+TGRL IHGDA AK+ LYR+RFLLL
Sbjct: 107 PIKKIFYENTGRLAIHGDASAKSALYRNRFLLL 139


>emb|CAN73546.1| hypothetical protein VITISV_038180 [Vitis vinifera]
          Length = 539

 Score =  103 bits (257), Expect = 1e-20
 Identities = 56/93 (60%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
 Frame = -1

Query: 280 LDELQYQSLKSSILDKEPVQRVVSLLSKAESAAEDDLXXXXXXXXS-VIDAFLIPKFRYD 104
           LDEL+ +SLKSSILDKE V RVVSLL +AE+A E+            ++DAFL+ KF YD
Sbjct: 47  LDELENESLKSSILDKESVHRVVSLLLEAEAAVEETPGAISTRSALRIVDAFLMSKFCYD 106

Query: 103 PVRKMFCEHTGRLPIHGDAPAKAWLYRDRFLLL 5
           P++K+F E+TGRL IHGDA AK+ LYR+RFLLL
Sbjct: 107 PIKKIFYENTGRLAIHGDASAKSALYRNRFLLL 139


>ref|XP_002318325.1| predicted protein [Populus trichocarpa] gi|222858998|gb|EEE96545.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  102 bits (254), Expect = 3e-20
 Identities = 59/101 (58%), Positives = 68/101 (67%), Gaps = 9/101 (8%)
 Frame = -1

Query: 280 LDELQYQSLK----SSILDKEPVQRVVSLLSKAESAAEDDLXXXXXXXXS-----VIDAF 128
           LD LQ QS K    SSILDKEPV R ++ L +A+ A ++D         S     VIDAF
Sbjct: 47  LDHLQSQSQKLGVRSSILDKEPVNRAITALLEADDAVDEDFIANGAVSSSTSAIRVIDAF 106

Query: 127 LIPKFRYDPVRKMFCEHTGRLPIHGDAPAKAWLYRDRFLLL 5
           LIPKFRYDP++K F EHTG L IHGDA AKA LY+DRFLLL
Sbjct: 107 LIPKFRYDPIKKQFHEHTGGLHIHGDASAKAALYKDRFLLL 147


>ref|XP_003574603.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Brachypodium
           distachyon]
          Length = 533

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 2/94 (2%)
 Frame = -1

Query: 280 LDELQYQSLKSSILDKEPVQRVVSLLSKAESA--AEDDLXXXXXXXXSVIDAFLIPKFRY 107
           LDEL  + LKSSILD + V+RVVSLL +AE A  A             V+D+F++P+F+Y
Sbjct: 50  LDELDKEPLKSSILDGDAVRRVVSLLVEAEEAVDAASPAATSARSALRVVDSFVVPRFQY 109

Query: 106 DPVRKMFCEHTGRLPIHGDAPAKAWLYRDRFLLL 5
           DP++K+F EHTGRL IHG+A  KA LYRDR+ +L
Sbjct: 110 DPIKKVFYEHTGRLAIHGEASDKAALYRDRYQVL 143


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