BLASTX nr result

ID: Atractylodes22_contig00047846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047846
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   107   1e-21
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]    87   1e-15
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    87   1e-15
emb|CAN72562.1| hypothetical protein VITISV_032210 [Vitis vinifera]    87   1e-15
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    86   2e-15

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/85 (60%), Positives = 58/85 (68%)
 Frame = -2

Query: 256  PVFHVSQLKKTVGDQPCFSTLPPHLQSDMEFVVEPEQLLEVRSKETQSGLQVEVLIQWSG 77
            PVFHVS LKK VG+ P   T+PPH+  DME VVEPE+LL+VR          E LI+W G
Sbjct: 1508 PVFHVSLLKKVVGNTPVLPTIPPHIDVDMELVVEPEELLDVRQIRQGKQTFTECLIKWKG 1567

Query: 76   LPLSEATWEDMSTIQYTYPSFHLED 2
            LP  EATWEDMS I   +PSFHLED
Sbjct: 1568 LPAFEATWEDMSPIHLRFPSFHLED 1592


>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/84 (47%), Positives = 55/84 (65%)
 Frame = -2

Query: 253  VFHVSQLKKTVGDQPCFSTLPPHLQSDMEFVVEPEQLLEVRSKETQSGLQVEVLIQWSGL 74
            VFHVS LK+ +G       L P L  D+E++VEP+Q+L++      + L +EVLIQW GL
Sbjct: 918  VFHVSXLKRALGSADLCQPLSPILVEDLEWLVEPDQVLDIHQSPNNNQLGIEVLIQWKGL 977

Query: 73   PLSEATWEDMSTIQYTYPSFHLED 2
            P  EA+WE + TI+  +P FHLED
Sbjct: 978  PQFEASWESVDTIKEHFPDFHLED 1001


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/85 (48%), Positives = 51/85 (60%)
 Frame = -2

Query: 256  PVFHVSQLKKTVGDQPCFSTLPPHLQSDMEFVVEPEQLLEVRSKETQSGLQVEVLIQWSG 77
            PVFH+SQLKK VG      T+PP L +D+    +PE LL +RS   +     EVLI+W  
Sbjct: 1441 PVFHISQLKKAVGSLQSSPTIPPQLTNDLVLDAQPESLLNIRSHPQKPAEVTEVLIKWLN 1500

Query: 76   LPLSEATWEDMSTIQYTYPSFHLED 2
            LP  EATWED +     +P FHLED
Sbjct: 1501 LPAFEATWEDAALFNARFPDFHLED 1525


>emb|CAN72562.1| hypothetical protein VITISV_032210 [Vitis vinifera]
          Length = 1003

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/85 (50%), Positives = 54/85 (63%)
 Frame = -2

Query: 256 PVFHVSQLKKTVGDQPCFSTLPPHLQSDMEFVVEPEQLLEVRSKETQSGLQVEVLIQWSG 77
           P+FH+SQL+K VG  P  S+LP  L ++ME +VEP  +L VR   T S    EVL+QW  
Sbjct: 713 PMFHISQLRKAVGTAPTSSSLPSQLTAEMELLVEPRTILGVRQCLTGSTFVTEVLVQWKD 772

Query: 76  LPLSEATWEDMSTIQYTYPSFHLED 2
           L   EATWE  +TIQ  +P FHL D
Sbjct: 773 LLDFEATWESFATIQNQFPEFHLVD 797


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 38/85 (44%), Positives = 51/85 (60%)
 Frame = -2

Query: 256  PVFHVSQLKKTVGDQPCFSTLPPHLQSDMEFVVEPEQLLEVRSKETQSGLQVEVLIQWSG 77
            PVFH+SQL+K VG  P F  LPP L +D+     P Q+L +R          E+L+QWS 
Sbjct: 1277 PVFHISQLRKAVGTAPVFPVLPPLLTTDLVLPSSPSQVLGIRPNPLNQAAPAEILVQWSD 1336

Query: 76   LPLSEATWEDMSTIQYTYPSFHLED 2
            +   EATWE++  I   +P+FHLED
Sbjct: 1337 MSADEATWENVQDIHERFPTFHLED 1361


Top