BLASTX nr result

ID: Atractylodes22_contig00047800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047800
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containin...   163   1e-38
ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containin...   163   1e-38
ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containin...   152   2e-35
ref|XP_002511264.1| nucleic acid binding protein, putative [Rici...   150   1e-34
gb|AFK47668.1| unknown [Medicago truncatula]                          148   4e-34

>ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 2
           [Vitis vinifera]
          Length = 481

 Score =  163 bits (413), Expect = 1e-38
 Identities = 71/107 (66%), Positives = 87/107 (81%)
 Frame = +1

Query: 1   KQREEDSDRPGKIECKFYLSSGGCKYGKACKYNHSKGRTAITPVLEYNFLGLPIRLGEKE 180
           K++EE  +RPG+ ECK+YL +GGCK+GKAC+YNH+K + +  PVLE NFLGLPIR+GEKE
Sbjct: 170 KEKEEFPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVPVLELNFLGLPIRMGEKE 229

Query: 181 CTYYMRNGSCKYGLDCRFNHPDPSPAGGIPATATYENGLSVHLQGAS 321
           C YYMR GSCKYG +CRFNHPDP+ AGG  + + Y NG SV LQGAS
Sbjct: 230 CPYYMRTGSCKYGANCRFNHPDPTAAGGYESPSGYGNGGSVPLQGAS 276



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 34/78 (43%), Positives = 50/78 (64%)
 Frame = +1

Query: 10  EEDSDRPGKIECKFYLSSGGCKYGKACKYNHSKGRTAITPVLEYNFLGLPIRLGEKECTY 189
           E+  +RPG+ EC ++L +G CK+  ACKY+H K R   +P    +  GLP+R  +  CT+
Sbjct: 357 EDFPERPGQPECSYFLKTGDCKFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTH 416

Query: 190 YMRNGSCKYGLDCRFNHP 243
           Y R G CK+G  C+F+HP
Sbjct: 417 YNRYGICKFGPACKFDHP 434


>ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 1
           [Vitis vinifera] gi|297733636|emb|CBI14883.3| unnamed
           protein product [Vitis vinifera]
          Length = 484

 Score =  163 bits (413), Expect = 1e-38
 Identities = 71/107 (66%), Positives = 87/107 (81%)
 Frame = +1

Query: 1   KQREEDSDRPGKIECKFYLSSGGCKYGKACKYNHSKGRTAITPVLEYNFLGLPIRLGEKE 180
           K++EE  +RPG+ ECK+YL +GGCK+GKAC+YNH+K + +  PVLE NFLGLPIR+GEKE
Sbjct: 170 KEKEEFPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVPVLELNFLGLPIRMGEKE 229

Query: 181 CTYYMRNGSCKYGLDCRFNHPDPSPAGGIPATATYENGLSVHLQGAS 321
           C YYMR GSCKYG +CRFNHPDP+ AGG  + + Y NG SV LQGAS
Sbjct: 230 CPYYMRTGSCKYGANCRFNHPDPTAAGGYESPSGYGNGGSVPLQGAS 276



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 34/78 (43%), Positives = 50/78 (64%)
 Frame = +1

Query: 10  EEDSDRPGKIECKFYLSSGGCKYGKACKYNHSKGRTAITPVLEYNFLGLPIRLGEKECTY 189
           E+  +RPG+ EC ++L +G CK+  ACKY+H K R   +P    +  GLP+R  +  CT+
Sbjct: 360 EDFPERPGQPECSYFLKTGDCKFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTH 419

Query: 190 YMRNGSCKYGLDCRFNHP 243
           Y R G CK+G  C+F+HP
Sbjct: 420 YNRYGICKFGPACKFDHP 437


>ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
           [Glycine max]
          Length = 570

 Score =  152 bits (385), Expect = 2e-35
 Identities = 64/106 (60%), Positives = 84/106 (79%)
 Frame = +1

Query: 4   QREEDSDRPGKIECKFYLSSGGCKYGKACKYNHSKGRTAITPVLEYNFLGLPIRLGEKEC 183
           +REE ++R G++ECK+YL SGGCK+GKACK+NH++G+++     E NFLGLPIR+GEKEC
Sbjct: 273 EREEQAERSGQMECKYYLRSGGCKFGKACKFNHTRGKSSSASATELNFLGLPIRVGEKEC 332

Query: 184 TYYMRNGSCKYGLDCRFNHPDPSPAGGIPATATYENGLSVHLQGAS 321
            YYMR GSCK+G +CRFNHPDP+  GG  + + Y NG S+ LQG S
Sbjct: 333 LYYMRTGSCKFGANCRFNHPDPTTVGGGDSPSGYGNGSSISLQGVS 378



 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 42/98 (42%), Positives = 58/98 (59%)
 Frame = +1

Query: 10  EEDSDRPGKIECKFYLSSGGCKYGKACKYNHSKGRTAITPVLEYNFLGLPIRLGEKECTY 189
           EE  +RPG+ EC ++L +G CK+   CK++H K R A  P+   +  GLP+R  +  CTY
Sbjct: 457 EEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPLCNLSDKGLPLRPDQNVCTY 516

Query: 190 YMRNGSCKYGLDCRFNHPDPSPAGGIPATATYENGLSV 303
           Y R G CK+G  C+F+HP PS   G    +TY N   V
Sbjct: 517 YRRYGICKFGPACKFDHPAPSTMAGHDQQSTYINSAGV 554


>ref|XP_002511264.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223550379|gb|EEF51866.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 495

 Score =  150 bits (379), Expect = 1e-34
 Identities = 69/113 (61%), Positives = 84/113 (74%), Gaps = 7/113 (6%)
 Frame = +1

Query: 1   KQREEDSDRPGKIECKFYLSSGGCKYGKACKYNHSKGR-------TAITPVLEYNFLGLP 159
           K+REE +DRPG+ ECK+YL +GGCKYGKAC+YNHS+ +       TA+ P L+ NFLGLP
Sbjct: 183 KEREEATDRPGQTECKYYLRTGGCKYGKACRYNHSRAKPLLLQAKTAVFPALDLNFLGLP 242

Query: 160 IRLGEKECTYYMRNGSCKYGLDCRFNHPDPSPAGGIPATATYENGLSVHLQGA 318
           IR GE+EC YYMRNGSCKYG +CRFNHPDP+  GG    A + NG S  LQ +
Sbjct: 243 IRPGERECPYYMRNGSCKYGANCRFNHPDPTTVGGSDPLA-FSNGGSASLQNS 294



 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 34/80 (42%), Positives = 51/80 (63%)
 Frame = +1

Query: 4   QREEDSDRPGKIECKFYLSSGGCKYGKACKYNHSKGRTAITPVLEYNFLGLPIRLGEKEC 183
           Q EE  +RPG+ EC +++ +G CK+   CKY+H K   + +P    +  GLP+R G+  C
Sbjct: 372 QVEEFPERPGQPECSYFMKTGDCKFKSNCKYHHPKNHISKSPPCVLSDKGLPLRPGQNIC 431

Query: 184 TYYMRNGSCKYGLDCRFNHP 243
           +YY R G CK+G  C+F+HP
Sbjct: 432 SYYSRYGICKFGPACKFDHP 451


>gb|AFK47668.1| unknown [Medicago truncatula]
          Length = 455

 Score =  148 bits (374), Expect = 4e-34
 Identities = 67/107 (62%), Positives = 81/107 (75%)
 Frame = +1

Query: 1   KQREEDSDRPGKIECKFYLSSGGCKYGKACKYNHSKGRTAITPVLEYNFLGLPIRLGEKE 180
           ++REE  +  G+ ECK+Y  SGGCK+GKACKYNHS+G TA  P+ E NFLGLPIRLGE+E
Sbjct: 275 REREEPEENAGQTECKYYQRSGGCKFGKACKYNHSRGFTA--PISELNFLGLPIRLGERE 332

Query: 181 CTYYMRNGSCKYGLDCRFNHPDPSPAGGIPATATYENGLSVHLQGAS 321
           C YYMR GSCK+G +CRFNHPDP+  GG    + Y NG SV L+G S
Sbjct: 333 CPYYMRTGSCKFGSNCRFNHPDPTTVGGSDPQSGYGNGGSVSLRGVS 379


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