BLASTX nr result

ID: Atractylodes22_contig00047783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047783
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...    69   5e-10
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    64   2e-08

>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
 Frame = -1

Query: 391  CPFCRRLPDSRSHLFFECHFPKETWNRMKRCLALEHLSDSWDDF---ATITHWGNAPKNA 221
            C  C R  +  +HLFFEC + K  W  +     +  ++  WD++   AT++  G   K+ 
Sbjct: 917  CSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTKGWDEWIRWATVSWHG---KSF 973

Query: 220  LTILRRLGFASLVFHVWKERNSRIHHQQSRTSQRVF 113
            +   R+L FA+ V+HVW+ERN+RI    SRTS  VF
Sbjct: 974  INFSRKLSFAATVYHVWQERNARIFAGLSRTSNLVF 1009


>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/106 (33%), Positives = 53/106 (50%)
 Frame = -1

Query: 400 DLLCPFCRRLPDSRSHLFFECHFPKETWNRMKRCLALEHLSDSWDDFATITHWGNAPKNA 221
           +L C FC+   ++R+HLFF C + +E W+ +   L   H S  W     +        N 
Sbjct: 314 NLSCVFCQEQTETRNHLFFTCRYSREVWSGLTSKLLTRHYSTDWTTILKLLTDKTLGNNR 373

Query: 220 LTILRRLGFASLVFHVWKERNSRIHHQQSRTSQRVFEDAFDEVRLK 83
           L +L R  F  LV+ +WKERNSR H ++   S  + +    EVR K
Sbjct: 374 LFLL-RYAFQILVYSIWKERNSRRHGEEPLPSALLLKRLDKEVRNK 418


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
 Frame = -1

Query: 391 CPFCRRLPDSRSHLFFECHFPKETWNRMKRCLALEHLSDSWDDF---ATITHWGNAPKNA 221
           C  C R  +  +HLFFEC + K  W  +     +  ++  WD++   AT++  G   K+ 
Sbjct: 202 CSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTKGWDEWIRWATVSWHG---KSF 258

Query: 220 LTILRRLGFASLVFHVWKERNSRIHHQQSRTSQRVF 113
           +   R+L FA+ V+HVW+ERN+RI    SRTS  VF
Sbjct: 259 VNFSRKLSFAATVYHVWQERNARIFAGLSRTSNLVF 294


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
 Frame = -1

Query: 391  CPFCRRLPDSRSHLFFECHFPKETWNRMKRCLALEHLSDSWDDF---ATITHWGNAPKNA 221
            C  C R  +  +HLFFEC + K  W  +     +  ++  WD++   AT++  G   K+ 
Sbjct: 1257 CSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTKGWDEWIRWATVSWHG---KSF 1313

Query: 220  LTILRRLGFASLVFHVWKERNSRIHHQQSRTSQRV 116
            +   R+L FA+ V+HVW+ERN+RI    SRT   V
Sbjct: 1314 VNFSRKLSFAATVYHVWQERNARIFAGMSRTPNLV 1348


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 27/94 (28%), Positives = 49/94 (52%)
 Frame = -1

Query: 391  CPFCRRLPDSRSHLFFECHFPKETWNRMKRCLALEHLSDSWDDFATITHWGNAPKNALTI 212
            C  C    ++R HLFF C +    W  + + L   + S  W+   T+    N P++ L +
Sbjct: 1396 CTLCNNAEETRDHLFFSCQYTSYVWEALTQRLLSTNYSRDWNRLFTLLCTSNLPRDHLFL 1455

Query: 211  LRRLGFASLVFHVWKERNSRIHHQQSRTSQRVFE 110
             R + F + ++H+W+ERN+R H + S  + R+ +
Sbjct: 1456 FRYV-FQASIYHIWRERNARRHGEISSPTNRLIK 1488


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