BLASTX nr result

ID: Atractylodes22_contig00047687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047687
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD39354.2| OSJNBa0059H15.5 [Oryza sativa Japonica Group]         120   2e-25
gb|ABF96568.1| retrotransposon protein, putative, Ty3-gypsy subc...   119   3e-25
gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]              118   4e-25
gb|AAQ56440.1| putative polyprotein [Oryza sativa Japonica Group...   118   4e-25
gb|ABA98406.1| retrotransposon protein, putative, Ty3-gypsy subc...   118   6e-25

>emb|CAD39354.2| OSJNBa0059H15.5 [Oryza sativa Japonica Group]
          Length = 1466

 Score =  120 bits (300), Expect = 2e-25
 Identities = 59/86 (68%), Positives = 69/86 (80%)
 Frame = -3

Query: 259  FLGLAGYYRRFVENFSRIALPMTQLLKKETKFN*GIKQNGSFDELKRRLVTAPILALPSG 80
            FLGLAGYYRRF+ENFS+IA PMTQLLKKE KF    + N SF+ELKRRLV+AP+L LP  
Sbjct: 858  FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLILPDQ 917

Query: 79   PGGYQVYSDASGTGLGCVLMQHGRVI 2
              G+Q+Y DAS  GLGCVLMQ G+V+
Sbjct: 918  TKGFQIYCDASRQGLGCVLMQDGKVV 943


>gb|ABF96568.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1548

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/86 (68%), Positives = 69/86 (80%)
 Frame = -3

Query: 259  FLGLAGYYRRFVENFSRIALPMTQLLKKETKFN*GIKQNGSFDELKRRLVTAPILALPSG 80
            FLGLAGYYRRF+ENFS+IA PMTQLLKKE KF   ++ N SF+ELKRRLV+AP+L LP  
Sbjct: 844  FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWSVECNRSFEELKRRLVSAPVLILPDQ 903

Query: 79   PGGYQVYSDASGTGLGCVLMQHGRVI 2
               +QVY DAS  GLGCVLMQ G+V+
Sbjct: 904  TKDFQVYCDASRQGLGCVLMQDGKVV 929


>gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]
          Length = 2037

 Score =  118 bits (296), Expect = 4e-25
 Identities = 59/86 (68%), Positives = 66/86 (76%)
 Frame = -3

Query: 259  FLGLAGYYRRFVENFSRIALPMTQLLKKETKFN*GIKQNGSFDELKRRLVTAPILALPSG 80
            FLGLAGYYRRFVENFSRI+ P+T+L +K  KF        SF ELK RL TAP+LA+PSG
Sbjct: 1725 FLGLAGYYRRFVENFSRISAPLTKLTQKNVKFQWSEACEKSFLELKERLTTAPVLAVPSG 1784

Query: 79   PGGYQVYSDASGTGLGCVLMQHGRVI 2
             GGY VY DAS  GLGCVLMQHG+VI
Sbjct: 1785 SGGYTVYCDASRVGLGCVLMQHGKVI 1810


>gb|AAQ56440.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|34015300|gb|AAQ56491.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1222

 Score =  118 bits (296), Expect = 4e-25
 Identities = 57/86 (66%), Positives = 69/86 (80%)
 Frame = -3

Query: 259 FLGLAGYYRRFVENFSRIALPMTQLLKKETKFN*GIKQNGSFDELKRRLVTAPILALPSG 80
           FLGLAGYYRRF+ENFS+IA PMTQLLKK+ KF   ++ N SF+ELK++LV+AP+L LP  
Sbjct: 628 FLGLAGYYRRFIENFSKIARPMTQLLKKDEKFKWSVECNQSFEELKKKLVSAPVLILPDQ 687

Query: 79  PGGYQVYSDASGTGLGCVLMQHGRVI 2
              +QVY DAS  GLGCVLMQ GRV+
Sbjct: 688 TKDFQVYCDASRQGLGCVLMQEGRVV 713


>gb|ABA98406.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/86 (67%), Positives = 68/86 (79%)
 Frame = -3

Query: 259  FLGLAGYYRRFVENFSRIALPMTQLLKKETKFN*GIKQNGSFDELKRRLVTAPILALPSG 80
            FLGLAGYYRRF+ENFS+IA PMTQLLKK+ KF    + N SF+ELK+RLV+AP+L LP  
Sbjct: 907  FLGLAGYYRRFIENFSKIARPMTQLLKKDEKFKWSAECNQSFEELKKRLVSAPVLILPDQ 966

Query: 79   PGGYQVYSDASGTGLGCVLMQHGRVI 2
               +QVY DAS  GLGCVLMQ GRV+
Sbjct: 967  TKDFQVYCDASRQGLGCVLMQEGRVV 992


Top